RNA–Protein interactions for RNA: ENST00000376188.1

PPP1R3F-202, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 2 BASIC

Gene PPP1R3F, Length 2,443 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-202ENST00000376188 A0A096LNT2 108 aa14.37□□□□□ -0.11
PPP1R3F-202ENST00000376188 PPBPP02775 128 aa14.37□□□□□ -0.11
PPP1R3F-202ENST00000376188 IGLL1P15814 213 aa14.37□□□□□ -0.11
PPP1R3F-202ENST00000376188 GPHB5Q86YW7 130 aa14.37□□□□□ -0.11
PPP1R3F-202ENST00000376188 USP24Q9UPU5 2620 aa14.37□□□□□ -0.11
PPP1R3F-202ENST00000376188 SOCS3O14543 225 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 OVOL1O14753 267 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 C20orf173Q96LM9 149 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 LINC00477Q96M19 166 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 ZNF747Q9BV97 191 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 ANKRD17O75179 2603 aaKnown RBP14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 LOC389332A0A1B0GUA5 103 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 MSRB1Q9NZV6 116 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 C11orf21Q9P2W6 132 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 LAMTOR2Q9Y2Q5 125 aa14.36□□□□□ -0.11
PPP1R3F-202ENST00000376188 DEFB112Q30KQ8 113 aa14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 ST20Q9HBF5 79 aa14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 DAZ1Q9NQZ3 744 aaKnown RBP14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 IGHV7-4-1A0A0J9YVY3 117 aa14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 RPLP1P05386 114 aaKnown RBP14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 OR10J6PQ8NGY7 276 aa14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 RNF185Q96GF1 192 aa14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 TIMM8BQ9Y5J9 83 aaPredicted RBP14.35□□□□□ -0.11
PPP1R3F-202ENST00000376188 NPYP01303 97 aa14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 IGHV4-59P01825 116 aa14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 LCNL1Q6ZST4 164 aa14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 BBC3Q96PG8 261 aaPredicted RBP14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 TCF21O43680 179 aa14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 LINC01545Q5VT33 79 aa14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 PEF1Q9UBV8 284 aaKnown RBP14.34□□□□□ -0.11
PPP1R3F-202ENST00000376188 HSBP1L1C9JCN9 74 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 TSPOP30536 169 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 FOXE3Q13461 319 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 RHPN1-AS1Q9BWJ2 59 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 MRPS16Q9Y3D3 137 aaKnown RBP14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 A0A096LNJ9 63 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 SMKR1H3BMG3 65 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 TGFAP01135 160 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 FAM106AQ4KMX7 169 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 PRSS57Q6UWY2 283 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 FAM208BQ5VWN6 2430 aa14.33□□□□□ -0.12
PPP1R3F-202ENST00000376188 K7EMT4 169 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 NCR2O95944 276 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 PSMB8P28062 276 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 RPL11P62913 178 aaKnown RBP14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 MAP1LC3AQ9H492 121 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 TMEM89A2RUT3 159 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 HBDP02042 147 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 LOXL1Q08397 574 aaPredicted RBP14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 SMIM15Q7Z3B0 74 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 ZNF843Q8N446 348 aa14.32□□□□□ -0.12
PPP1R3F-202ENST00000376188 CACNG7P62955 275 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 BATFQ16520 125 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 TMEM95Q3KNT9 176 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 ZNF462Q96JM2 2506 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 H0Y8G0 127 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 SNAI2O43623 268 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 TM4SF20Q53R12 229 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 SMPXQ9UHP9 88 aa14.31□□□□□ -0.12
PPP1R3F-202ENST00000376188 CRYBG3Q68DQ2 2970 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 IGHV4-4A0A075B6R2 117 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 TCAPO15273 167 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 PRR9Q5T870 116 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 CELSR2Q9HCU4 2923 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 SRSF1Q07955 248 aaKnown RBP eCLIP14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 COL5A1-AS1Q5SY13 56 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 SAMD13Q5VXD3 122 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 ZFAND2AQ8N6M9 145 aa14.3□□□□□ -0.12
PPP1R3F-202ENST00000376188 ZFYVE26Q68DK2 2539 aa14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 TRAV21A0A0B4J279 112 aa14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 TRBV7-9A0A0J9YWB2 115 aa14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 hDV102S1A0JD36 115 aa14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 A1L4Q6 167 aa14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 MS4A6AQ9H2W1 248 aa14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 NXT2Q9NPJ8 142 aaKnown RBP14.29□□□□□ -0.12
PPP1R3F-202ENST00000376188 CR1P17927 2039 aa14.28□□□□□ -0.12
PPP1R3F-202ENST00000376188 MAP1AP78559 2803 aaPredicted RBP14.28□□□□□ -0.12
PPP1R3F-202ENST00000376188 LINC01546A6NGU7 62 aa14.28□□□□□ -0.12
PPP1R3F-202ENST00000376188 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
PPP1R3F-202ENST00000376188 OR8A1Q8NGG7 326 aa14.28□□□□□ -0.12
PPP1R3F-202ENST00000376188 SPANXN1Q5VSR9 72 aa14.27□□□□□ -0.12
PPP1R3F-202ENST00000376188 FAM19A4Q96LR4 140 aa14.27□□□□□ -0.12
PPP1R3F-202ENST00000376188 UFC1Q9Y3C8 167 aa14.27□□□□□ -0.12
PPP1R3F-202ENST00000376188 USP9YO00507 2555 aaPredicted RBP14.27□□□□□ -0.12
PPP1R3F-202ENST00000376188 RNF223E7ERA6 249 aa14.27□□□□□ -0.13
PPP1R3F-202ENST00000376188 MAPK1IP1LQ8NDC0 245 aa14.27□□□□□ -0.13
PPP1R3F-202ENST00000376188 MCRIP2Q9BUT9 160 aaKnown RBP14.27□□□□□ -0.13
PPP1R3F-202ENST00000376188 VPREB3Q9UKI3 123 aa14.27□□□□□ -0.13
PPP1R3F-202ENST00000376188 UTP20O75691 2785 aaKnown RBP14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 FSHBP01225 129 aa14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 EVI2AP22794 236 aa14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 Q6ZQT7 251 aa14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 LRRK2Q5S007 2527 aa14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 H3BVH4 76 aa14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 APRG1Q8IVJ8 170 aa14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 BEX4Q9NWD9 120 aaPredicted RBP14.26□□□□□ -0.13
PPP1R3F-202ENST00000376188 IGKV3-7A0A075B6H7 116 aa14.25□□□□□ -0.13
PPP1R3F-202ENST00000376188 ID1P41134 155 aa14.25□□□□□ -0.13
PPP1R3F-202ENST00000376188 LGALS9BQ3B8N2 356 aa14.25□□□□□ -0.13
PPP1R3F-202ENST00000376188 LGALS9CQ6DKI2 356 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms