RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 FOXI2Q6ZQN5 318 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 ZNF575Q86XF7 245 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 ZFAND2AQ8N6M9 145 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 Q8TAT8 98 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 A0A0J9YX75 114 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 C5orf52A6NGY3 159 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BKO60814 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BJP06899 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BOP23527 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BBP33778 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BDP58876 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BCP62807 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST2H2BEQ16778 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.32□□□□□ -1.08
PDPN-202ENST00000376057 TMEM136Q6ZRR5 245 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 Q71RC1 249 aaPredicted RBP8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BHQ93079 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BNQ99877 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIST1H2BMQ99879 126 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 CNFNQ9BYD5 112 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 TRAPPC1Q9Y5R8 145 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 HIVEP2P31629 2446 aa8.32□□□□□ -1.08
PDPN-202ENST00000376057 KLLNB2CW77 178 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 CA1P00915 261 aaPredicted RBP8.31□□□□□ -1.08
PDPN-202ENST00000376057 FRZBQ92765 325 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 S100A8P05109 93 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 IGLC6P0CF74 106 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 CTRLP40313 264 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 LEPP41159 167 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 KRTAP10-3P60369 221 aa8.31□□□□□ -1.08
PDPN-202ENST00000376057 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 ACANP16112 2415 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 OR4C46A6NHA9 309 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 F2Z2F3 143 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 UBE2CO00762 179 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 HBBP68871 147 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 DYNLRB2Q8TF09 96 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 NIT2Q9NQR4 276 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 TRAV21A0A0B4J279 112 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 SMIM6P0DI80 62 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 MED14OSP0DP75 135 aa8.3□□□□□ -1.08
PDPN-202ENST00000376057 ZNF256Q9Y2P7 627 aaPredicted RBP8.3□□□□□ -1.08
PDPN-202ENST00000376057 TCL1AP56279 114 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 FABP9Q0Z7S8 132 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 RIGQ13278 110 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 EBLN2Q6P2I7 272 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 ZNF493Q6ZR52 646 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 TMEM61Q8N0U2 210 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 SVIPQ8NHG7 77 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 DUX3Q96PT4 197 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 SSBP4Q9BWG4 385 aaPredicted RBP8.29□□□□□ -1.08
PDPN-202ENST00000376057 CBY1Q9Y3M2 126 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 PSMG4Q5JS54 123 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 ZFP82Q8N141 532 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 CITED1Q99966 193 aa8.29□□□□□ -1.08
PDPN-202ENST00000376057 MRPL18Q9H0U6 180 aaKnown RBP8.29□□□□□ -1.08
PDPN-202ENST00000376057 CUBNO60494 3623 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 IGHV4-4A0A075B6R2 117 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 A0A1B0GV90 55 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 HOXA5P20719 270 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 TSPOP30536 169 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 TLN2Q9Y4G6 2542 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 PRSS47A8MTI9 375 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 SNURFLB1AK76 121 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 HLA-DRB4P13762 266 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 DMRTA1Q5VZB9 504 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 HLA-DRB4X5D2U9 266 aa8.28□□□□□ -1.08
PDPN-202ENST00000376057 IGKV3D-20A0A0C4DH25 116 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 A0A1W2PRX2 142 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 SNAI2O43623 268 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 IGLV1-51P01701 117 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 ZNF688P0C7X2 276 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 Q0VG73 95 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
PDPN-202ENST00000376057 BORCS7Q96B45 105 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 PGLYRP4Q96LB8 373 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 SONP18583 2426 aaKnown RBP8.27□□□□□ -1.09
PDPN-202ENST00000376057 OR5AL1P0C617 328 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 TDRG1Q3Y452 100 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 PRR9Q5T870 116 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 AMTNQ6UX39 209 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 WFDC3Q8IUB2 231 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 HIVEP1P15822 2718 aa8.27□□□□□ -1.09
PDPN-202ENST00000376057 NSD1Q96L73 2696 aaPredicted RBP8.27□□□□□ -1.09
PDPN-202ENST00000376057 IGKV3-7A0A075B6H7 116 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 GPX1P07203 203 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 GDF5OSQ5U4N7 250 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
PDPN-202ENST00000376057 LINC00482Q8N8I6 264 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 FER1L6-AS1Q8NA97 138 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 C11orf21Q9P2W6 132 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 F6UB75 175 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 APCSP02743 223 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 ORM1P02763 201 aa8.26□□□□□ -1.09
PDPN-202ENST00000376057 ZNF705DP0CH99 300 aaPredicted RBP8.26□□□□□ -1.09
PDPN-202ENST00000376057 ZNF705BP0CI00 300 aaPredicted RBP8.26□□□□□ -1.09
PDPN-202ENST00000376057 OR10J3Q5JRS4 329 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms