RNA–Protein interactions for RNA: ENST00000375661.5

LSM2-208, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM2, Length 876 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-208ENST00000375661 SOHLH1Q5JUK2 328 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 TEX261Q6UWH6 196 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 GOLT1AQ6ZVE7 132 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 Q8TAT8 98 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 FAM210BQ96KR6 192 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 IGF2BP2-AS1Q96M15 143 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 NKX6-2Q9C056 277 aaPredicted RBP8.67□□□□□ -1.02
LSM2-208ENST00000375661 CELA1Q9UNI1 258 aa8.67□□□□□ -1.02
LSM2-208ENST00000375661 DNAH17Q9UFH2 4485 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 TRAV8-1A0A0A6YYK1 113 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 M0R2N4 97 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 IFNA7P01567 189 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 IGLV2-11P01706 119 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 CRISP2P16562 243 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 LEPP41159 167 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 PPT1P50897 306 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 ZNF138P52744 262 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 BLOC1S1P78537 153 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 TMEM78Q5T7P6 136 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 CST9LP1Q5W188 147 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 ZNF705AQ6ZN79 300 aaPredicted RBP8.66□□□□□ -1.02
LSM2-208ENST00000375661 ZNF680Q8NEM1 530 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 LYPD6BQ8NI32 183 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 SGK494Q96LW2 274 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 GNG13Q9P2W3 67 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 DNAH2Q9P225 4427 aa8.66□□□□□ -1.02
LSM2-208ENST00000375661 SERTM2A0A1B0GWG4 89 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 KLLNB2CW77 178 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 TEX46H3BTG2 121 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 J3KRW8 73 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 PEX7O00628 323 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 TSPOP30536 169 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 PRR9Q5T870 116 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 GFI1BQ5VTD9 330 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 Q6ZR54 194 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 ZFAND2AQ8N6M9 145 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 CYB561D1Q8N8Q1 229 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 TVP23CQ96ET8 276 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 LINC00479Q96M42 142 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 NEU1Q99519 415 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 ATG101Q9BSB4 218 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 MANBALQ9NQG1 85 aa8.65□□□□□ -1.02
LSM2-208ENST00000375661 TRBV7-9A0A0J9YWB2 115 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 TEX48A0A1B0GUV7 120 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 TMEM189A5PLL7 270 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 SMIM9A6NGZ8 99 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 INSP01308 110 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 RNF212Q495C1 297 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 UBE2DNLQ8IWF7 75 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 PCNPQ8WW12 178 aaKnown RBP8.64□□□□□ -1.03
LSM2-208ENST00000375661 HIST1H2BAQ96A08 127 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 KRTAP4-5Q9BYR2 181 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 PSG8Q9UQ74 426 aa8.64□□□□□ -1.03
LSM2-208ENST00000375661 NACAE9PAV3 2078 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 IGHV3OR16-12A0A075B7B8 117 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 TRAV34A0A0B4J273 112 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 PRM2P04554 102 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 NMBP08949 121 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 SPART-AS1P0CW21 52 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 FLI1Q01543 452 aaPredicted RBP8.63□□□□□ -1.03
LSM2-208ENST00000375661 BTN1A1Q13410 526 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 Q6ZQT7 251 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 ZNF767PQ75MW2 155 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 TMEM75Q8N9X5 138 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 TCEAL7Q9BRU2 100 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 GOLT1BQ9Y3E0 138 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 LENEPQ9Y5L5 61 aa8.63□□□□□ -1.03
LSM2-208ENST00000375661 TRAV12-3A0A0B4J271 114 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 SCO2A0A1W2PP80 73 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 C7orf71A4D174 169 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 K7EQM0 130 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 ZNF324O75467 553 aaPredicted RBP8.62□□□□□ -1.03
LSM2-208ENST00000375661 GPX1P07203 203 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 BCL2P10415 239 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 ZNF575Q86XF7 245 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 LINC01587Q99440 93 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 C20orf144Q9BQM9 153 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 KLF12Q9Y4X4 402 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 PKD1P98161 4303 aa8.62□□□□□ -1.03
LSM2-208ENST00000375661 LOC102723971A0A1B0GUV8 181 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 FBLL1A6NHQ2 334 aaKnown RBP8.61□□□□□ -1.03
LSM2-208ENST00000375661 ZNF705GA8MUZ8 300 aaPredicted RBP8.61□□□□□ -1.03
LSM2-208ENST00000375661 F6UZH7 168 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 CDK2AP2O75956 126 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 IFNA1P01562 189 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 RNASE4P34096 147 aaKnown RBP8.61□□□□□ -1.03
LSM2-208ENST00000375661 C1orf134Q5TEV5 83 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 TMEM256Q8N2U0 113 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 TXNDC17Q9BRA2 123 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 TMEM208Q9BTX3 173 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 TREM1Q9NP99 234 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 ABCA13Q86UQ4 5058 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 DYNC1H1Q14204 4646 aaKnown RBP8.61□□□□□ -1.03
LSM2-208ENST00000375661 DNAH11Q96DT5 4516 aa8.61□□□□□ -1.03
LSM2-208ENST00000375661 IGLV2-18A0A075B6J9 118 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 TRBV6-1A0A0K0K1D8 114 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 H7BYZ3 331 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 AZU1P20160 251 aa8.6□□□□□ -1.03
LSM2-208ENST00000375661 AKR1C3P42330 323 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms