RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 C16orf92Q96LL3 132 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 KLK15Q9H2R5 256 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 UFC1Q9Y3C8 167 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 NOTCH3Q9UM47 2321 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 TRAV41A0A0B4J266 112 aa13.12□□□□□ -0.31
RXRB-201ENST00000374680 SONP18583 2426 aaKnown RBP13.11□□□□□ -0.31
RXRB-201ENST00000374680 SLC25A34Q6PIV7 304 aa13.11□□□□□ -0.31
RXRB-201ENST00000374680 C8orf86Q6ZUL3 223 aa13.11□□□□□ -0.31
RXRB-201ENST00000374680 PPP1R14DQ9NXH3 145 aa13.11□□□□□ -0.31
RXRB-201ENST00000374680 CBY3A6NI87 242 aa13.11□□□□□ -0.31
RXRB-201ENST00000374680 H3BUX3 64 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 PF4V1P10720 104 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 ATP5J2P56134 94 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 TRAV8-2A0A0B4J237 113 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 IGKV3D-20A0A0C4DH25 116 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 F6UB75 175 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 SMAD7O15105 426 aaKnown RBP13.1□□□□□ -0.31
RXRB-201ENST00000374680 CRXO43186 299 aaPredicted RBP13.1□□□□□ -0.31
RXRB-201ENST00000374680 Q6AWC8 147 aa13.1□□□□□ -0.31
RXRB-201ENST00000374680 ANKRD17O75179 2603 aaKnown RBP13.1□□□□□ -0.31
RXRB-201ENST00000374680 TMEM95Q3KNT9 176 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 TMEM78Q5T7P6 136 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 PET117Q6UWS5 81 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 PIFOQ8TCI5 191 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 IGHV4-30-2A0A087WSY4 118 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 CCL19Q99731 98 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 MRPS16Q9Y3D3 137 aaKnown RBP13.09□□□□□ -0.31
RXRB-201ENST00000374680 ARL3P36405 182 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 PAX8Q06710 450 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 KIR3DS1Q14943 382 aa13.09□□□□□ -0.31
RXRB-201ENST00000374680 EDN2P20800 178 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 PTTG1IPP53801 180 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 ANKRD39Q53RE8 183 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 ZNF738Q8NE65 137 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 IGHV1-69DA0A0B4J2H0 117 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 IGHV1-69P01742 117 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 ZNF493Q6ZR52 646 aa13.08□□□□□ -0.32
RXRB-201ENST00000374680 C20orf173Q96LM9 149 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 PRORYQ9H606 182 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 ST20Q9HBF5 79 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 NAV2Q8IVL1 2488 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 IGLC6P0CF74 106 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 DKK2Q9UBU2 259 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 MOB4Q9Y3A3 225 aa13.07□□□□□ -0.32
RXRB-201ENST00000374680 A0A1B0GW15 77 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 PRR9Q5T870 116 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 LINC01545Q5VT33 79 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 RNF185Q96GF1 192 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 MXRA5Q9NR99 2828 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 EPG5Q9HCE0 2579 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 CCDC168Q8NDH2 2452 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 H3BVH4 76 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 CCL25O15444 150 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 VAMP3Q15836 100 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 SCRT2Q9NQ03 307 aa13.06□□□□□ -0.32
RXRB-201ENST00000374680 LEPP41159 167 aa13.05□□□□□ -0.32
RXRB-201ENST00000374680 NMUP48645 174 aa13.05□□□□□ -0.32
RXRB-201ENST00000374680 TTTY13Q9BZ97 58 aa13.05□□□□□ -0.32
RXRB-201ENST00000374680 AVPP01185 164 aa13.05□□□□□ -0.32
RXRB-201ENST00000374680 NAA38Q9BRA0 125 aaKnown RBP13.05□□□□□ -0.32
RXRB-201ENST00000374680 TRBV7-1A0A0A6YYK4 115 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 M0R381 172 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 TM4SF20Q53R12 229 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 SPANXN1Q5VSR9 72 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 IFI27L1Q96BM0 104 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 PIMREGQ9BSJ6 248 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 TNFRSF6BO95407 300 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 HBDP02042 147 aa13.04□□□□□ -0.32
RXRB-201ENST00000374680 PRSS1P07477 247 aa13.03□□□□□ -0.32
RXRB-201ENST00000374680 RPS20P60866 119 aaKnown RBP13.03□□□□□ -0.32
RXRB-201ENST00000374680 HIF1ANQ9NWT6 349 aa13.03□□□□□ -0.32
RXRB-201ENST00000374680 CLEC2AQ6UVW9 174 aa13.03□□□□□ -0.32
RXRB-201ENST00000374680 C10orf99Q6UWK7 81 aa13.03□□□□□ -0.32
RXRB-201ENST00000374680 SLC50A1Q9BRV3 221 aa13.03□□□□□ -0.32
RXRB-201ENST00000374680 TEX15Q9BXT5 2789 aa13.03□□□□□ -0.32
RXRB-201ENST00000374680 HIST1H1AQ02539 215 aaPredicted RBP13.02□□□□□ -0.32
RXRB-201ENST00000374680 MAP1LC3AQ9H492 121 aa13.02□□□□□ -0.32
RXRB-201ENST00000374680 CBY1Q9Y3M2 126 aa13.02□□□□□ -0.32
RXRB-201ENST00000374680 COX11Q9Y6N1 276 aa13.02□□□□□ -0.32
RXRB-201ENST00000374680 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.33
RXRB-201ENST00000374680 PRB1P04280 392 aa13.02□□□□□ -0.33
RXRB-201ENST00000374680 SFTPCP11686 197 aa13.02□□□□□ -0.33
RXRB-201ENST00000374680 BVES-AS1Q5T3Y7 98 aa13.02□□□□□ -0.33
RXRB-201ENST00000374680 FBN2P35556 2912 aa13.02□□□□□ -0.33
RXRB-201ENST00000374680 PCP2Q8IVA1 136 aa13.02□□□□□ -0.33
RXRB-201ENST00000374680 U3KQK5 164 aa13.02□□□□□ -0.33
RXRB-201ENST00000374680 AGRNO00468 2067 aa13.01□□□□□ -0.33
RXRB-201ENST00000374680 IGKV3-20P01619 116 aa13.01□□□□□ -0.33
RXRB-201ENST00000374680 S100A7P31151 101 aa13.01□□□□□ -0.33
RXRB-201ENST00000374680 GATD1Q8NB37 220 aa13.01□□□□□ -0.33
RXRB-201ENST00000374680 OR4X2Q8NGF9 303 aa13.01□□□□□ -0.33
RXRB-201ENST00000374680 TMEM158Q8WZ71 300 aa13□□□□□ -0.33
RXRB-201ENST00000374680 S100A4P26447 101 aaKnown RBP13□□□□□ -0.33
RXRB-201ENST00000374680 RNASE4P34096 147 aaKnown RBP13□□□□□ -0.33
RXRB-201ENST00000374680 RAB9AP51151 201 aa13□□□□□ -0.33
RXRB-201ENST00000374680 C10orf105Q8TEF2 133 aa13□□□□□ -0.33
RXRB-201ENST00000374680 A1L4Q6 167 aa12.99□□□□□ -0.33
RXRB-201ENST00000374680 WNK1Q9H4A3 2382 aa12.99□□□□□ -0.33
RXRB-201ENST00000374680 C7orf71A4D174 169 aa12.99□□□□□ -0.33
RXRB-201ENST00000374680 LINC01559Q495D7 138 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms