RNA–Protein interactions for RNA: ENST00000374199.8

PRPF4-202, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRPF4, Length 3,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-202ENST00000374199 C4orf3Q8WVX3 66 aa9.47□□□□□ -0.89
PRPF4-202ENST00000374199 EDN2P20800 178 aa9.46□□□□□ -0.89
PRPF4-202ENST00000374199 RIGQ13278 110 aa9.46□□□□□ -0.89
PRPF4-202ENST00000374199 ADAMTSL5Q6ZMM2 481 aa9.46□□□□□ -0.89
PRPF4-202ENST00000374199 FAM208BQ5VWN6 2430 aa9.46□□□□□ -0.9
PRPF4-202ENST00000374199 TRAV2A0A0B4J234 112 aa9.46□□□□□ -0.9
PRPF4-202ENST00000374199 PRR9Q5T870 116 aa9.46□□□□□ -0.9
PRPF4-202ENST00000374199 FOSL1P15407 271 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 NIT1Q86X76 327 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 DEFB125Q8N687 156 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 C16orf92Q96LL3 132 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 ESM1Q9NQ30 184 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 IGHV4OR15-8A0A075B7B6 117 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 IGHV3OR16-13A0A075B7E8 117 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 A0A087WW49 117 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 IGHV3-49A0A0A0MS15 119 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 IGHV3-74A0A0B4J1X5 117 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 DNAJC9-AS1A6NH13 148 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 KLLNB2CW77 178 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 DDTP30046 118 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 KIAA1644Q3SXP7 199 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 LYZL1Q6UWQ5 148 aa9.45□□□□□ -0.9
PRPF4-202ENST00000374199 ZNF324O75467 553 aaPredicted RBP9.44□□□□□ -0.9
PRPF4-202ENST00000374199 MED14OSP0DP75 135 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 CHCHD1Q96BP2 118 aaKnown RBP9.44□□□□□ -0.9
PRPF4-202ENST00000374199 SCRT2Q9NQ03 307 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 OR5AL1P0C617 328 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 SSTP61278 116 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 FHL3Q13643 280 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 TMEM78Q5T7P6 136 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 Q6ZSV7 163 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 NAV2Q8IVL1 2488 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 ABCA12Q86UK0 2595 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 K7EQG2 157 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 RNF114Q9Y508 228 aa9.44□□□□□ -0.9
PRPF4-202ENST00000374199 RNASE1P07998 156 aaKnown RBP9.43□□□□□ -0.9
PRPF4-202ENST00000374199 TMEM191AQ9H0A3 160 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 PRSS47A8MTI9 375 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 NXPH4O95158 308 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 FAM104BQ5XKR9 115 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 TEX43Q6ZNM6 134 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 OR8A1Q8NGG7 326 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 TSTD3H0UI37 97 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 HOXD3P31249 432 aaPredicted RBP9.43□□□□□ -0.9
PRPF4-202ENST00000374199 CAMPP49913 170 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 PKIAP61925 76 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 FER1L6-AS1Q8NA97 138 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 RNF185Q96GF1 192 aa9.43□□□□□ -0.9
PRPF4-202ENST00000374199 C2orf70A6NJV1 201 aa9.42□□□□□ -0.9
PRPF4-202ENST00000374199 CRXO43186 299 aaPredicted RBP9.42□□□□□ -0.9
PRPF4-202ENST00000374199 POM121L12Q8N7R1 296 aa9.42□□□□□ -0.9
PRPF4-202ENST00000374199 PRB4P10163 310 aaPredicted RBP9.42□□□□□ -0.9
PRPF4-202ENST00000374199 BAGE3Q86Y29 109 aa9.42□□□□□ -0.9
PRPF4-202ENST00000374199 KLHDC1Q8N7A1 406 aa9.42□□□□□ -0.9
PRPF4-202ENST00000374199 MS4A6AQ9H2W1 248 aa9.42□□□□□ -0.9
PRPF4-202ENST00000374199 UNC79Q9P2D8 2635 aa9.42□□□□□ -0.9
PRPF4-202ENST00000374199 FAM181BA6NEQ2 426 aa9.41□□□□□ -0.9
PRPF4-202ENST00000374199 IQCJQ1A5X6 159 aa9.41□□□□□ -0.9
PRPF4-202ENST00000374199 ZNF738Q8NE65 137 aa9.41□□□□□ -0.9
PRPF4-202ENST00000374199 KIR2DL5BA0A0G2JN68 375 aa9.4□□□□□ -0.9
PRPF4-202ENST00000374199 KIR2DL5BA0A0G2JPC4 375 aa9.4□□□□□ -0.9
PRPF4-202ENST00000374199 KIR2DL5AQ8N109 375 aa9.4□□□□□ -0.9
PRPF4-202ENST00000374199 OR10J6PQ8NGY7 276 aa9.4□□□□□ -0.91
PRPF4-202ENST00000374199 SIGLEC8Q9NYZ4 499 aa9.4□□□□□ -0.91
PRPF4-202ENST00000374199 ZNF124Q15973 351 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 TDRG1Q3Y452 100 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 HELZ2Q9BYK8 2649 aaKnown RBP9.39□□□□□ -0.91
PRPF4-202ENST00000374199 Q6ZQT7 251 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 C18orf65Q6ZTR6 163 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 LAMTOR2Q9Y2Q5 125 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 GCN1Q92616 2671 aaKnown RBP9.39□□□□□ -0.91
PRPF4-202ENST00000374199 A0A0J9YX75 114 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 LINC01619G3V211 115 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 NDUFA7O95182 113 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 ID1P41134 155 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 NAGKQ9UJ70 344 aa9.39□□□□□ -0.91
PRPF4-202ENST00000374199 PMCHP20382 165 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 NTF3P20783 257 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 ZNF664Q8N3J9 261 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 OTOGQ6ZRI0 2925 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 CSN3P07498 182 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 CACNG7P62955 275 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 MRPL51Q4U2R6 128 aaKnown RBP9.38□□□□□ -0.91
PRPF4-202ENST00000374199 AMTNQ6UX39 209 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 BORCS7Q96B45 105 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 CLUHP3Q96NS8 147 aa9.38□□□□□ -0.91
PRPF4-202ENST00000374199 ITPR2Q14571 2701 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 TRAV21A0A0B4J279 112 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 RAB4AP20338 218 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 SYNJ2BPP57105 145 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 HILS1P60008 231 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 CSPG4Q6UVK1 2322 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 IGHV1-24A0A0C4DH33 117 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 LINC00614P0C842 121 aa9.37□□□□□ -0.91
PRPF4-202ENST00000374199 A0A096LNJ9 63 aa9.36□□□□□ -0.91
PRPF4-202ENST00000374199 PPBPP02775 128 aa9.36□□□□□ -0.91
PRPF4-202ENST00000374199 OR9G4Q8NGQ1 327 aa9.36□□□□□ -0.91
PRPF4-202ENST00000374199 FLNAP21333 2647 aaKnown RBP9.36□□□□□ -0.91
PRPF4-202ENST00000374199 ORM1P02763 201 aa9.36□□□□□ -0.91
PRPF4-202ENST00000374199 ZNF705DP0CH99 300 aaPredicted RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms