RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 APELAP0DMC3 54 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 DEFB109BQ30KR1 87 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 Q6ZT83 130 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 SVILO95425 2214 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 ITPR1Q14643 2758 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 ASIPP42127 132 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 VMA21Q3ZAQ7 101 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 TMEM78Q5T7P6 136 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 GAFA1Q96PS6 74 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 DEFB127Q9H1M4 99 aa10.07□□□□□ -0.8
PRPF4-201ENST00000374198 MSMPQ1L6U9 139 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 COX8CQ7Z4L0 72 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 DEFB108BQ8NET1 73 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 CCL13Q99616 98 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 DSCAMO60469 2012 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 F8VRH5 84 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 H7C1H1 209 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 CEACAM4O75871 244 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 PRTN3P24158 256 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 ARL3P36405 182 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 LAGE3Q14657 143 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 PLGLAQ15195 96 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 ZNF575Q86XF7 245 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 FAM216BQ8N7L0 139 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 PROCRQ9UNN8 238 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 CFAP47Q6ZTR5 3102 aa10.06□□□□□ -0.8
PRPF4-201ENST00000374198 H3BRN7 92 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 LY6DQ14210 128 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 CNFNQ9BYD5 112 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 SPRR3Q9UBC9 169 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 CRLF1O75462 422 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 CD7P09564 240 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 PPP1R27Q86WC6 154 aa10.05□□□□□ -0.8
PRPF4-201ENST00000374198 BBC3Q96PG8 261 aaPredicted RBP10.05□□□□□ -0.8
PRPF4-201ENST00000374198 MRPS12O15235 138 aaKnown RBP10.04□□□□□ -0.8
PRPF4-201ENST00000374198 SPRY3O43610 288 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 SRSF9Q13242 221 aaKnown RBP eCLIP10.04□□□□□ -0.8
PRPF4-201ENST00000374198 Q6Q795 121 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 OR11H6Q8NGC7 330 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 PRR25Q96S07 402 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 AAMDCQ9H7C9 122 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 SPANXA1Q9NS26 97 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 TRAV8-2A0A0B4J237 113 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 TRAV12-1A0A0B4J245 112 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 IGHV1-18A0A0C4DH31 117 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 RPL27AP46776 148 aaKnown RBP10.04□□□□□ -0.8
PRPF4-201ENST00000374198 ZNF80P51504 273 aaPredicted RBP10.04□□□□□ -0.8
PRPF4-201ENST00000374198 FAM159AQ6UWV7 190 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 PRR14LQ5THK1 2151 aa10.04□□□□□ -0.8
PRPF4-201ENST00000374198 IGKV1-17P01599 117 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 IGLV1-44P01699 117 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 CD40P25942 277 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 EFNA4P52798 201 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 DTX2Q86UW9 622 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 MGAQ8IWI9 3026 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 CACNA1GO43497 2377 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 SCGB1C2P0DMR2 95 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 RNF7Q9UBF6 113 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 IGKV2-40A0A087WW87 121 aaPredicted RBP10.03□□□□□ -0.8
PRPF4-201ENST00000374198 TRGV5A0A0B4J1U4 118 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 FCN3O75636 299 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 IGKV2D-40P01614 121 aaPredicted RBP10.03□□□□□ -0.8
PRPF4-201ENST00000374198 PRB1P04280 392 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 SCGB1D4Q6XE38 83 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 CTSZQ9UBR2 303 aa10.03□□□□□ -0.8
PRPF4-201ENST00000374198 IGSF10Q6WRI0 2623 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 TGFAP01135 160 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 PLEKHB2Q96CS7 222 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 PLXNB1O43157 2135 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 ORM1P02763 201 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 PDE6HQ13956 83 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 CNEP1R1Q8N9A8 125 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 PSMG3-AS1Q96PY0 264 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 PRADC1Q9BSG0 188 aa10.02□□□□□ -0.81
PRPF4-201ENST00000374198 M0QXV9 152 aa10.01□□□□□ -0.81
PRPF4-201ENST00000374198 SLC25A20O43772 301 aa10.01□□□□□ -0.81
PRPF4-201ENST00000374198 CCL3L1P16619 93 aa10.01□□□□□ -0.81
PRPF4-201ENST00000374198 SRSF2Q01130 221 aaKnown RBP10.01□□□□□ -0.81
PRPF4-201ENST00000374198 C1orf162Q8NEQ5 155 aaPredicted RBP10.01□□□□□ -0.81
PRPF4-201ENST00000374198 I3L2K1 104 aa10.01□□□□□ -0.81
PRPF4-201ENST00000374198 IGHG4P01861 327 aa10.01□□□□□ -0.81
PRPF4-201ENST00000374198 YAE1D1Q9NRH1 226 aa10.01□□□□□ -0.81
PRPF4-201ENST00000374198 ATRXP46100 2492 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 ENSAO43768 121 aaKnown RBP10□□□□□ -0.81
PRPF4-201ENST00000374198 PRR30Q53SZ7 412 aaPredicted RBP10□□□□□ -0.81
PRPF4-201ENST00000374198 MEIG1Q5JSS6 88 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 NRACQ8N912 160 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 Q8TAT8 98 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 GATA4P43694 442 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 Q6ZQT7 251 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 ZNF491Q8N8L2 437 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 VKORC1Q9BQB6 163 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 PIEZO2Q9H5I5 2752 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 VPREB3Q9UKI3 123 aa10□□□□□ -0.81
PRPF4-201ENST00000374198 RNF125Q96EQ8 232 aa9.99□□□□□ -0.81
PRPF4-201ENST00000374198 COX6B1P14854 86 aa9.99□□□□□ -0.81
PRPF4-201ENST00000374198 SLC25A16P16260 332 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms