RNA–Protein interactions for RNA: ENST00000373010.5

USP49-202, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 5 BASIC

Gene USP49, Length 2,446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-202ENST00000373010 MAP1LC3CQ9BXW4 147 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 DSCR9P59020 149 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 HSPB8Q9UJY1 196 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 SELENOKQ9Y6D0 94 aa14.29□□□□□ -0.12
USP49-202ENST00000373010 ANKRD17O75179 2603 aaKnown RBP14.28□□□□□ -0.12
USP49-202ENST00000373010 BRI3O95415 125 aa14.28□□□□□ -0.12
USP49-202ENST00000373010 NPYP01303 97 aa14.28□□□□□ -0.12
USP49-202ENST00000373010 CKS2P33552 79 aa14.28□□□□□ -0.12
USP49-202ENST00000373010 HNRNPA3P51991 378 aaKnown RBP14.28□□□□□ -0.12
USP49-202ENST00000373010 ZNF738Q8NE65 137 aa14.28□□□□□ -0.12
USP49-202ENST00000373010 FAM208BQ5VWN6 2430 aa14.28□□□□□ -0.12
USP49-202ENST00000373010 IGLV1-40P01703 118 aa14.27□□□□□ -0.12
USP49-202ENST00000373010 HIST1H1AQ02539 215 aaPredicted RBP14.27□□□□□ -0.12
USP49-202ENST00000373010 FOXE3Q13461 319 aa14.27□□□□□ -0.12
USP49-202ENST00000373010 CNFNQ9BYD5 112 aa14.27□□□□□ -0.12
USP49-202ENST00000373010 TMEM191AQ9H0A3 160 aa14.27□□□□□ -0.12
USP49-202ENST00000373010 POLQO75417 2590 aa14.27□□□□□ -0.12
USP49-202ENST00000373010 C20orf202A1L168 122 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 DEFB1P60022 68 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 C9orf139Q6ZV77 190 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 OR10AG1Q8NH19 301 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 RNF185Q96GF1 192 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 PMCHL2Q9BQD1 86 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 NPFFR1Q9GZQ6 430 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 FBN2P35556 2912 aa14.27□□□□□ -0.13
USP49-202ENST00000373010 A0A096LNJ9 63 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 hDV102S1A0JD36 115 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 A1L4Q6 167 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 IGHV4-59P01825 116 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 FXYD7P58549 80 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 DEFB112Q30KQ8 113 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 CYB5R2Q6BCY4 276 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 GAS8-AS1O95177 125 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 SLC25A16P16260 332 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 PRR9Q5T870 116 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 PET117Q6UWS5 81 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 ZNF747Q9BV97 191 aa14.26□□□□□ -0.13
USP49-202ENST00000373010 TCAPO15273 167 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 PRSS57Q6UWY2 283 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 LINC01356Q8N9X3 169 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 USP9YO00507 2555 aaPredicted RBP14.25□□□□□ -0.13
USP49-202ENST00000373010 CENPEQ02224 2701 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 IGKV3-7A0A075B6H7 116 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 J3KRW8 73 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 GATA3P23771 443 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 RPL11P62913 178 aaKnown RBP14.25□□□□□ -0.13
USP49-202ENST00000373010 CFHR3Q02985 330 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 TM4SF20Q53R12 229 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 TP73-AS1Q9UF72 201 aa14.25□□□□□ -0.13
USP49-202ENST00000373010 A0A096LNT2 108 aa14.24□□□□□ -0.13
USP49-202ENST00000373010 SOCS3O14543 225 aa14.24□□□□□ -0.13
USP49-202ENST00000373010 TSPOP30536 169 aa14.24□□□□□ -0.13
USP49-202ENST00000373010 RPLP1P05386 114 aaKnown RBP14.24□□□□□ -0.13
USP49-202ENST00000373010 SRSF1Q07955 248 aaKnown RBP eCLIP14.24□□□□□ -0.13
USP49-202ENST00000373010 LRRK2Q5S007 2527 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 A0A0G2JLM5 398 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 COX6B1P14854 86 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 ZANQ9Y493 2812 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 TGFAP01135 160 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 EDN2P20800 178 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 PPP1R14DQ9NXH3 145 aa14.23□□□□□ -0.13
USP49-202ENST00000373010 IGHV7-4-1A0A0J9YVY3 117 aa14.22□□□□□ -0.13
USP49-202ENST00000373010 LINC01545Q5VT33 79 aa14.22□□□□□ -0.13
USP49-202ENST00000373010 C10orf99Q6UWK7 81 aa14.22□□□□□ -0.13
USP49-202ENST00000373010 RHPN1-AS1Q9BWJ2 59 aa14.22□□□□□ -0.13
USP49-202ENST00000373010 LAMTOR2Q9Y2Q5 125 aa14.22□□□□□ -0.13
USP49-202ENST00000373010 OR8A1Q8NGG7 326 aa14.22□□□□□ -0.13
USP49-202ENST00000373010 GATA1P15976 413 aaPredicted RBP14.21□□□□□ -0.13
USP49-202ENST00000373010 TFPI2P48307 235 aa14.21□□□□□ -0.13
USP49-202ENST00000373010 F6UB75 175 aa14.21□□□□□ -0.14
USP49-202ENST00000373010 TCF21O43680 179 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 SRD5A1P18405 259 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 EVI2AP22794 236 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 G0S2P27469 103 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 OR10J6PQ8NGY7 276 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 ST20Q9HBF5 79 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 ZFAND2AQ8N6M9 145 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 LINC00477Q96M19 166 aa14.2□□□□□ -0.14
USP49-202ENST00000373010 PEF1Q9UBV8 284 aaKnown RBP14.2□□□□□ -0.14
USP49-202ENST00000373010 RNF223E7ERA6 249 aa14.19□□□□□ -0.14
USP49-202ENST00000373010 OVOL1O14753 267 aa14.19□□□□□ -0.14
USP49-202ENST00000373010 KRTAP10-9P60411 292 aa14.19□□□□□ -0.14
USP49-202ENST00000373010 ZNF843Q8N446 348 aa14.19□□□□□ -0.14
USP49-202ENST00000373010 STPG4Q8N801 248 aa14.19□□□□□ -0.14
USP49-202ENST00000373010 DAZ1Q9NQZ3 744 aaKnown RBP14.19□□□□□ -0.14
USP49-202ENST00000373010 MRPS16Q9Y3D3 137 aaKnown RBP14.19□□□□□ -0.14
USP49-202ENST00000373010 UBR5O95071 2799 aaPredicted RBP14.19□□□□□ -0.14
USP49-202ENST00000373010 HSBP1L1C9JCN9 74 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 H3BVH4 76 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 TNFRSF6BO95407 300 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 HBDP02042 147 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 PPBPP02775 128 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 HINT1P49773 126 aaPredicted RBP14.18□□□□□ -0.14
USP49-202ENST00000373010 MAP1LC3AQ9H492 121 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 SMPXQ9UHP9 88 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 LENEPQ9Y5L5 61 aa14.18□□□□□ -0.14
USP49-202ENST00000373010 PSMB8P28062 276 aa14.17□□□□□ -0.14
USP49-202ENST00000373010 COL5A1-AS1Q5SY13 56 aa14.17□□□□□ -0.14
USP49-202ENST00000373010 ZNF25P17030 456 aaPredicted RBP14.17□□□□□ -0.14
USP49-202ENST00000373010 SPRY2O43597 315 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms