RNA–Protein interactions for RNA: ENST00000372285.7

CD40-202, Transcript of CD40 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD40, Length 1,729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-202ENST00000372285 FAM19A4Q96LR4 140 aa13.52□□□□□ -0.25
CD40-202ENST00000372285 HIST1H2BNQ99877 126 aa13.52□□□□□ -0.25
CD40-202ENST00000372285 HIST1H2BMQ99879 126 aa13.52□□□□□ -0.25
CD40-202ENST00000372285 GNB1LQ9BYB4 327 aa13.52□□□□□ -0.25
CD40-202ENST00000372285 TRAPPC1Q9Y5R8 145 aa13.52□□□□□ -0.25
CD40-202ENST00000372285 TMEM189A5PLL7 270 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 F6UB75 175 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 FRMD6-AS1P0C7T7 363 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 ZNF688P0C7X2 276 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 TRGC1P0CF51 173 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 DEFB114Q30KQ6 69 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 WDR73Q6P4I2 378 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
CD40-202ENST00000372285 GZMBP10144 247 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 FABP9Q0Z7S8 132 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 PSMG4Q5JS54 123 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 MRPL54Q6P161 138 aaKnown RBP13.5□□□□□ -0.25
CD40-202ENST00000372285 ATP5L2Q7Z4Y8 100 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 DYNLRB2Q8TF09 96 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 SAV1Q9H4B6 383 aaPredicted RBP13.5□□□□□ -0.25
CD40-202ENST00000372285 XKRY2A2RUG3 117 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 RPS20P60866 119 aaKnown RBP13.5□□□□□ -0.25
CD40-202ENST00000372285 NDUFA11Q86Y39 141 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 TMEM61Q8N0U2 210 aa13.5□□□□□ -0.25
CD40-202ENST00000372285 A0A1B0GXF2 115 aa13.49□□□□□ -0.25
CD40-202ENST00000372285 MT-ND6P03923 174 aa13.49□□□□□ -0.25
CD40-202ENST00000372285 S100A6P06703 90 aa13.49□□□□□ -0.25
CD40-202ENST00000372285 TMEM136Q6ZRR5 245 aa13.49□□□□□ -0.25
CD40-202ENST00000372285 ZFAND2AQ8N6M9 145 aa13.49□□□□□ -0.25
CD40-202ENST00000372285 PGLYRP4Q96LB8 373 aa13.49□□□□□ -0.25
CD40-202ENST00000372285 A0A0J9YX75 114 aa13.48□□□□□ -0.25
CD40-202ENST00000372285 CRISP2P16562 243 aa13.48□□□□□ -0.25
CD40-202ENST00000372285 NSUN5P1Q3KNT7 163 aa13.48□□□□□ -0.25
CD40-202ENST00000372285 LINC01559Q495D7 138 aa13.48□□□□□ -0.25
CD40-202ENST00000372285 Q6AWC8 147 aa13.48□□□□□ -0.25
CD40-202ENST00000372285 APRG1Q8IVJ8 170 aa13.48□□□□□ -0.25
CD40-202ENST00000372285 TRAV25A0A0B4J276 109 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 SNURFLB1AK76 121 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 ZNF575Q86XF7 245 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 MRPL18Q9H0U6 180 aaKnown RBP13.47□□□□□ -0.25
CD40-202ENST00000372285 SORL1Q92673 2214 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 C5orf52A6NGY3 159 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 ORM1P02763 201 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 PRR9Q5T870 116 aa13.47□□□□□ -0.25
CD40-202ENST00000372285 TMSB15BA0A087X1C1 80 aa13.46□□□□□ -0.25
CD40-202ENST00000372285 HLA-DQA1P01909 254 aa13.46□□□□□ -0.25
CD40-202ENST00000372285 SNRPEP62304 92 aaKnown RBP13.46□□□□□ -0.25
CD40-202ENST00000372285 CD300EQ496F6 205 aaPredicted RBP13.46□□□□□ -0.25
CD40-202ENST00000372285 GDF5OSQ5U4N7 250 aa13.46□□□□□ -0.25
CD40-202ENST00000372285 ODF3Q96PU9 254 aa13.46□□□□□ -0.25
CD40-202ENST00000372285 NIPBLQ6KC79 2804 aaeCLIP13.46□□□□□ -0.26
CD40-202ENST00000372285 HBBP68871 147 aa13.45□□□□□ -0.26
CD40-202ENST00000372285 EBLN2Q6P2I7 272 aa13.45□□□□□ -0.26
CD40-202ENST00000372285 SPAG8Q99932 426 aaPredicted RBP13.45□□□□□ -0.26
CD40-202ENST00000372285 C11orf21Q9P2W6 132 aa13.45□□□□□ -0.26
CD40-202ENST00000372285 CYSRT1A8MQ03 144 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 RAB4BP61018 213 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 FOXI2Q6ZQN5 318 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.44□□□□□ -0.26
CD40-202ENST00000372285 A0A1B0GUT8 65 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 DUSP14O95147 198 aaKnown RBP13.44□□□□□ -0.26
CD40-202ENST00000372285 GPX1P07203 203 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 IGLC6P0CF74 106 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 NDUFA6P56556 154 aa13.44□□□□□ -0.26
CD40-202ENST00000372285 TRAV21A0A0B4J279 112 aa13.43□□□□□ -0.26
CD40-202ENST00000372285 IGKV3D-20A0A0C4DH25 116 aa13.43□□□□□ -0.26
CD40-202ENST00000372285 OR4C46A6NHA9 309 aa13.43□□□□□ -0.26
CD40-202ENST00000372285 KLLNB2CW77 178 aa13.43□□□□□ -0.26
CD40-202ENST00000372285 CD33P20138 364 aa13.43□□□□□ -0.26
CD40-202ENST00000372285 AGRNO00468 2067 aa13.43□□□□□ -0.26
CD40-202ENST00000372285 A0A1B0GW15 77 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 UBE2CO00762 179 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 ARMS2P0C7Q2 107 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 CTRLP40313 264 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 LEPP41159 167 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 CAMPP49913 170 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 RIGQ13278 110 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 LYZL1Q6UWQ5 148 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 ZNF256Q9Y2P7 627 aaPredicted RBP13.42□□□□□ -0.26
CD40-202ENST00000372285 DEFB131AP59861 70 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 Q6ZQT7 251 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 FER1L6-AS1Q8NA97 138 aa13.42□□□□□ -0.26
CD40-202ENST00000372285 A8MTW9 85 aa13.41□□□□□ -0.26
CD40-202ENST00000372285 J3KRW8 73 aa13.41□□□□□ -0.26
CD40-202ENST00000372285 APCSP02743 223 aa13.41□□□□□ -0.26
CD40-202ENST00000372285 HOXA5P20719 270 aa13.41□□□□□ -0.26
CD40-202ENST00000372285 RNASE4P34096 147 aaKnown RBP13.41□□□□□ -0.26
CD40-202ENST00000372285 BORCS7Q96B45 105 aa13.41□□□□□ -0.26
CD40-202ENST00000372285 GRIFINA4D1Z8 144 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 S100A8P05109 93 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 KIR3DS1Q14943 382 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 COA6Q5JTJ3 125 aaKnown RBP13.4□□□□□ -0.26
CD40-202ENST00000372285 GATD1Q8NB37 220 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 TPPP3Q9BW30 176 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 MAP6D1Q9H9H5 199 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 JMJD1CQ15652 2540 aa13.4□□□□□ -0.26
CD40-202ENST00000372285 SAP30O75446 220 aa13.39□□□□□ -0.27
CD40-202ENST00000372285 SLAQ13239 276 aa13.39□□□□□ -0.27
CD40-202ENST00000372285 AMTNQ6UX39 209 aa13.39□□□□□ -0.27
CD40-202ENST00000372285 TENM1Q9UKZ4 2725 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms