RNA–Protein interactions for RNA: ENST00000372276.7

CD40-201, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,623 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-201ENST00000372276 PSMG3-AS1Q96PY0 264 aa13.84□□□□□ -0.19
CD40-201ENST00000372276 MED13LQ71F56 2210 aa13.83□□□□□ -0.19
CD40-201ENST00000372276 IGHV3OR16-10A0A075B7F0 116 aa13.83□□□□□ -0.2
CD40-201ENST00000372276 IGHV3-66A0A0C4DH42 116 aa13.83□□□□□ -0.2
CD40-201ENST00000372276 DLEU1O43261 78 aa13.83□□□□□ -0.2
CD40-201ENST00000372276 ZNF575Q86XF7 245 aa13.83□□□□□ -0.2
CD40-201ENST00000372276 DEFB125Q8N687 156 aa13.83□□□□□ -0.2
CD40-201ENST00000372276 OR10J6PQ8NGY7 276 aa13.83□□□□□ -0.2
CD40-201ENST00000372276 LOC389332A0A1B0GUA5 103 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 TMEM89A2RUT3 159 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 PRSS47A8MTI9 375 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 IGHV4-38-2P0DP08 117 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 C12orf54Q6X4T0 127 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 RNF185Q96GF1 192 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 TMEM208Q9BTX3 173 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 SCRT2Q9NQ03 307 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 IGHV4-30-2A0A087WSY4 118 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 IGKV3D-20A0A0C4DH25 116 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 J3QLI3 93 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 K7EMT4 169 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 SNAI2O43623 268 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 IGLV1-40P01703 118 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 ZNF738Q8NE65 137 aa13.82□□□□□ -0.2
CD40-201ENST00000372276 DCHS2Q6V1P9 2916 aa13.81□□□□□ -0.2
CD40-201ENST00000372276 ZNF207O43670 478 aaKnown RBP13.81□□□□□ -0.2
CD40-201ENST00000372276 NPYP01303 97 aa13.81□□□□□ -0.2
CD40-201ENST00000372276 ORAOV1Q8WV07 137 aa13.81□□□□□ -0.2
CD40-201ENST00000372276 GOLT1BQ9Y3E0 138 aa13.81□□□□□ -0.2
CD40-201ENST00000372276 IGHV3OR16-13A0A075B7E8 117 aa13.8□□□□□ -0.2
CD40-201ENST00000372276 IGHV3-74A0A0B4J1X5 117 aa13.8□□□□□ -0.2
CD40-201ENST00000372276 TRAV21A0A0B4J279 112 aa13.8□□□□□ -0.2
CD40-201ENST00000372276 MED14OSP0DP75 135 aa13.8□□□□□ -0.2
CD40-201ENST00000372276 PF4V1P10720 104 aa13.8□□□□□ -0.2
CD40-201ENST00000372276 OR4X2Q8NGF9 303 aa13.8□□□□□ -0.2
CD40-201ENST00000372276 USP9XQ93008 2570 aaPredicted RBP13.8□□□□□ -0.2
CD40-201ENST00000372276 A0A096LNJ9 63 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 hDV102S1A0JD36 115 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 PRB4P10163 310 aaPredicted RBP13.79□□□□□ -0.2
CD40-201ENST00000372276 FCER1GP30273 86 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 LY6EQ16553 131 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 STPG4Q8N801 248 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 IFI27L1Q96BM0 104 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 TACC2O95359 2948 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 IGHV3-49A0A0A0MS15 119 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 TNFRSF6BO95407 300 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 COX8AP10176 69 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 G0S2P27469 103 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 FAM106AQ4KMX7 169 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 Q8N8P6 123 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 LINC01356Q8N9X3 169 aa13.79□□□□□ -0.2
CD40-201ENST00000372276 IGHV7-4-1A0A0J9YVY3 117 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 SOCS3O14543 225 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 HINT1P49773 126 aaPredicted RBP13.78□□□□□ -0.2
CD40-201ENST00000372276 PRSS57Q6UWY2 283 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 OR8A1Q8NGG7 326 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 MRAP2Q96G30 205 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 DAZ1Q9NQZ3 744 aaKnown RBP13.78□□□□□ -0.2
CD40-201ENST00000372276 LINC00527Q9UJ94 153 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 TIMM8BQ9Y5J9 83 aaPredicted RBP13.78□□□□□ -0.2
CD40-201ENST00000372276 LRRK2Q5S007 2527 aa13.78□□□□□ -0.2
CD40-201ENST00000372276 MUC21A0A0G2JKD1 596 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 MUC21A0A140T8X8 626 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 ID1P41134 155 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 FOXE3Q13461 319 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 MUC21Q5SSG8 566 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 SPANXN1Q5VSR9 72 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 SMPXQ9UHP9 88 aa13.77□□□□□ -0.21
CD40-201ENST00000372276 H0Y8G0 127 aa13.76□□□□□ -0.21
CD40-201ENST00000372276 CFHR3Q02985 330 aa13.76□□□□□ -0.21
CD40-201ENST00000372276 OR2K2Q8NGT1 345 aa13.76□□□□□ -0.21
CD40-201ENST00000372276 MSRB1Q9NZV6 116 aa13.76□□□□□ -0.21
CD40-201ENST00000372276 PEF1Q9UBV8 284 aaKnown RBP13.76□□□□□ -0.21
CD40-201ENST00000372276 SMAD7O15105 426 aaKnown RBP13.75□□□□□ -0.21
CD40-201ENST00000372276 UNQ9165/PRO28630Q6UXU0 137 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 GPHB5Q86YW7 130 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 APRG1Q8IVJ8 170 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 C11orf21Q9P2W6 132 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 UFC1Q9Y3C8 167 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 DOPEY1Q5JWR5 2465 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 ABCA2Q9BZC7 2435 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 SMKR1H3BMG3 65 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 K7EMI3 77 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 SIVA1O15304 175 aa13.75□□□□□ -0.21
CD40-201ENST00000372276 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
CD40-201ENST00000372276 ATP5LO75964 103 aa13.74□□□□□ -0.21
CD40-201ENST00000372276 NCR2O95944 276 aa13.74□□□□□ -0.21
CD40-201ENST00000372276 PPP1R17O96001 155 aa13.74□□□□□ -0.21
CD40-201ENST00000372276 FAM19A4Q96LR4 140 aa13.74□□□□□ -0.21
CD40-201ENST00000372276 RHPN1-AS1Q9BWJ2 59 aa13.74□□□□□ -0.21
CD40-201ENST00000372276 ASIPP42127 132 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 BLCAPP62952 87 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 ZNF124Q15973 351 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 ZFAND2AQ8N6M9 145 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 OR9G4Q8NGQ1 327 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 C20orf173Q96LM9 149 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 COX11Q9Y6N1 276 aa13.73□□□□□ -0.21
CD40-201ENST00000372276 TRBV12-3P01733 135 aa13.72□□□□□ -0.21
CD40-201ENST00000372276 LEPP41159 167 aa13.72□□□□□ -0.21
CD40-201ENST00000372276 TFPI2P48307 235 aa13.72□□□□□ -0.21
CD40-201ENST00000372276 KLK15Q9H2R5 256 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms