RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 CT45A10P0DMU9 189 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 EVI2AP22794 236 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 SRIP30626 198 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 MPV17L2Q567V2 206 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 ZNF880Q6PDB4 577 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 OR13C6PQ8NH95 151 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 TENM3Q9P273 2699 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 FAM231BA6NCW3 169 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 FOXI3A8MTJ6 420 aaPredicted RBP5.42□□□□□ -1.54
USP1-202ENST00000371146 M0R2Z0 102 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 TCL1AP56279 114 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 SPANXCQ9NY87 97 aa5.42□□□□□ -1.54
USP1-202ENST00000371146 TMSB15BA0A087X1C1 80 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 TRBV6-6A0A0A6YYG2 114 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 LY6LH3BQJ8 138 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 H3BRM9 83 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 BMPR1BO00238 502 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 NUPR1O60356 82 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 ZNF253O75346 499 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 IGLV2-23P01705 113 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 PMCHP20382 165 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 BRWD1-AS2P59051 145 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 KRTAP10-3P60369 221 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 TMEM61Q8N0U2 210 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 OR2G3Q8NGZ4 309 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 SDF2L1Q9HCN8 221 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 F11RQ9Y624 299 aaKnown RBP5.41□□□□□ -1.54
USP1-202ENST00000371146 TRAV5A0A0B4J249 113 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 IZUMO1RA6ND01 250 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 C17orf112F2Z3M2 114 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 RND3P61587 244 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 DEFB135Q30KP9 77 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 TMEM97Q5BJF2 176 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 FFAR4Q5NUL3 377 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 STHQ8IWL8 128 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 MRPL36Q9P0J6 103 aaKnown RBP5.41□□□□□ -1.54
USP1-202ENST00000371146 TRRAPQ9Y4A5 3859 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 TRAV9-2A0A087WT02 112 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 IGLV2-14P01704 120 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 PRCDQ00LT1 54 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 SIGLEC15Q6ZMC9 328 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 TMEM86BQ8N661 226 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 RARRES2Q99969 163 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 GGTLC1Q9BX51 225 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 SLC39A9Q9NUM3 307 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 PXMP4Q9Y6I8 212 aa5.41□□□□□ -1.54
USP1-202ENST00000371146 MUC21A0A0G2JKD1 596 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 MUC21A0A140T8X8 626 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 A0A1B0GX51 115 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 C7orf71A4D174 169 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 LGALS1P09382 135 aaKnown RBP5.4□□□□□ -1.54
USP1-202ENST00000371146 CFHR3Q02985 330 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 MUC21Q5SSG8 566 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 TEPPQ6URK8 271 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 CYB561D1Q8N8Q1 229 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 TMEM116Q8NCL8 245 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 RETNQ9HD89 108 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 MANBALQ9NQG1 85 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 SPANXB1Q9NS25 103 aaPredicted RBP5.4□□□□□ -1.54
USP1-202ENST00000371146 ZNF257Q9Y2Q1 563 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 ICAM4Q14773 271 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 RNF182Q8N6D2 247 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 TMEM252Q8N6L7 170 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 OR1L4Q8NGR5 311 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 AP1S3Q96PC3 154 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 TM2D2Q9BX73 214 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 SMAD5-AS1Q9Y6J3 95 aa5.4□□□□□ -1.54
USP1-202ENST00000371146 APOHP02749 345 aaPredicted RBP5.4□□□□□ -1.55
USP1-202ENST00000371146 RPS28P62857 69 aaKnown RBP5.4□□□□□ -1.55
USP1-202ENST00000371146 Q0VG73 95 aa5.4□□□□□ -1.55
USP1-202ENST00000371146 EBLN2Q6P2I7 272 aa5.4□□□□□ -1.55
USP1-202ENST00000371146 ZNF491Q8N8L2 437 aa5.4□□□□□ -1.55
USP1-202ENST00000371146 DEFB104AQ8WTQ1 72 aa5.4□□□□□ -1.55
USP1-202ENST00000371146 RAB40CQ96S21 281 aa5.4□□□□□ -1.55
USP1-202ENST00000371146 SAMD10Q9BYL1 202 aa5.4□□□□□ -1.55
USP1-202ENST00000371146 CBLN1P23435 193 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 LHFPL1Q86WI0 220 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 ZNRF2Q8NHG8 242 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 DEFB130BP0DP73 79 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 DEFB130AP0DP74 79 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 C10orf113Q5VZT2 155 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 LINC00305Q7Z4B0 112 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 DAZ1Q9NQZ3 744 aaKnown RBP5.39□□□□□ -1.55
USP1-202ENST00000371146 SIGLEC8Q9NYZ4 499 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 HIGD1AQ9Y241 93 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 TRAV12-2A0A075B6T6 113 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 A0A1W2PS18 150 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 F8W1H4 67 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 GPX1P07203 203 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 PYYP10082 97 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 RNASE2P10153 161 aaKnown RBP5.39□□□□□ -1.55
USP1-202ENST00000371146 GALR1P47211 349 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 LINC00310P59036 64 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 UBE2L3P68036 154 aaKnown RBP5.39□□□□□ -1.55
USP1-202ENST00000371146 FAM90A2PQ658T7 463 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 NDUFA11Q86Y39 141 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 SYT8Q8NBV8 401 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 USMG5Q96IX5 58 aa5.39□□□□□ -1.55
USP1-202ENST00000371146 SPAG8Q99932 426 aaPredicted RBP5.39□□□□□ -1.55
USP1-202ENST00000371146 NDUFA4L2Q9NRX3 87 aa5.39□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms