RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 TMEM75Q8N9X5 138 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 TMEM263Q8WUH6 116 aaKnown RBP10.65□□□□□ -0.7
COL9A1-204ENST00000370496 PYGO2Q9BRQ0 406 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 TCEAL7Q9BRU2 100 aa10.65□□□□□ -0.7
COL9A1-204ENST00000370496 NUPR2A6NF83 97 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 FBLL1A6NHQ2 334 aaKnown RBP10.65□□□□□ -0.71
COL9A1-204ENST00000370496 RGS13O14921 159 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 SPART-AS1P0CW21 52 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 ATP5G3P48201 142 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 FLI1Q01543 452 aaPredicted RBP10.65□□□□□ -0.71
COL9A1-204ENST00000370496 FAM222AQ5U5X8 452 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 PRNTQ86SH4 94 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 HIST1H2BAQ96A08 127 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 TREM1Q9NP99 234 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 MANBALQ9NQG1 85 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 GNG13Q9P2W3 67 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 PSG8Q9UQ74 426 aa10.65□□□□□ -0.71
COL9A1-204ENST00000370496 AZU1P20160 251 aa10.64□□□□□ -0.71
COL9A1-204ENST00000370496 ZNF767PQ75MW2 155 aa10.64□□□□□ -0.71
COL9A1-204ENST00000370496 RNASE8Q8TDE3 154 aaKnown RBP10.64□□□□□ -0.71
COL9A1-204ENST00000370496 DKK2Q9UBU2 259 aa10.64□□□□□ -0.71
COL9A1-204ENST00000370496 TRAV1-1A0A0B4J248 108 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 TRAV34A0A0B4J273 112 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 CBY3A6NI87 242 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 ZNF324O75467 553 aaPredicted RBP10.63□□□□□ -0.71
COL9A1-204ENST00000370496 UBE2G1P62253 170 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 ZNF493Q6ZR52 646 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 Q6ZTC4 211 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 Q86TA4 180 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 ZNF680Q8NEM1 530 aa10.63□□□□□ -0.71
COL9A1-204ENST00000370496 PHLDA1Q8WV24 401 aaPredicted RBP10.63□□□□□ -0.71
COL9A1-204ENST00000370496 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
COL9A1-204ENST00000370496 C11orf94C9JXX5 98 aa10.62□□□□□ -0.71
COL9A1-204ENST00000370496 IFNA1P01562 189 aa10.62□□□□□ -0.71
COL9A1-204ENST00000370496 AKR1C3P42330 323 aa10.62□□□□□ -0.71
COL9A1-204ENST00000370496 Q6AWC8 147 aa10.62□□□□□ -0.71
COL9A1-204ENST00000370496 EIF4E3Q8N5X7 224 aaKnown RBP10.62□□□□□ -0.71
COL9A1-204ENST00000370496 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
COL9A1-204ENST00000370496 CSMD3Q7Z407 3707 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 PLAC8L1A1L4L8 177 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 LYRM9A8MSI8 78 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 IGLV2-11P01706 119 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 DAD1P61803 113 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 CCL20P78556 96 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 C12orf74Q32Q52 190 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 TVP23CQ96ET8 276 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 FMC1Q96HJ9 113 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 LINC00479Q96M42 142 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 C8orf49Q96NF6 230 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
COL9A1-204ENST00000370496 KLK5Q9Y337 293 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-204ENST00000370496 TIMM8BQ9Y5J9 83 aaPredicted RBP10.61□□□□□ -0.71
COL9A1-204ENST00000370496 TRAV21A0A0B4J279 112 aa10.6□□□□□ -0.71
COL9A1-204ENST00000370496 SCO2A0A1W2PP80 73 aa10.6□□□□□ -0.71
COL9A1-204ENST00000370496 SMUG1Q53HV7 270 aa10.6□□□□□ -0.71
COL9A1-204ENST00000370496 SAPCD1Q5SSQ6 148 aa10.6□□□□□ -0.71
COL9A1-204ENST00000370496 CEMP1Q6PRD7 247 aaPredicted RBP10.6□□□□□ -0.71
COL9A1-204ENST00000370496 FAM159AQ6UWV7 190 aa10.6□□□□□ -0.71
COL9A1-204ENST00000370496 Q6ZQT7 251 aa10.6□□□□□ -0.71
COL9A1-204ENST00000370496 STARD9Q9P2P6 4700 aa10.59□□□□□ -0.71
COL9A1-204ENST00000370496 TRAV10A0A0B4J240 114 aa10.59□□□□□ -0.71
COL9A1-204ENST00000370496 GCGP01275 180 aa10.59□□□□□ -0.71
COL9A1-204ENST00000370496 BLOC1S1P78537 153 aa10.59□□□□□ -0.71
COL9A1-204ENST00000370496 ANXA2RQ3ZCQ2 193 aa10.59□□□□□ -0.71
COL9A1-204ENST00000370496 NOP10Q9NPE3 64 aaKnown RBP10.59□□□□□ -0.71
COL9A1-204ENST00000370496 DEFB130BP0DP73 79 aa10.58□□□□□ -0.72
COL9A1-204ENST00000370496 DEFB130AP0DP74 79 aa10.58□□□□□ -0.72
COL9A1-204ENST00000370496 BCL2P10415 239 aa10.58□□□□□ -0.72
COL9A1-204ENST00000370496 ZNF415Q09FC8 603 aa10.58□□□□□ -0.72
COL9A1-204ENST00000370496 GSN-AS1Q9NRJ2 163 aa10.58□□□□□ -0.72
COL9A1-204ENST00000370496 TRGV11A0A075B6L2 103 aa10.57□□□□□ -0.72
COL9A1-204ENST00000370496 DEFB131BA0A096LNP1 70 aa10.57□□□□□ -0.72
COL9A1-204ENST00000370496 HTN3P15516 51 aa10.57□□□□□ -0.72
COL9A1-204ENST00000370496 MEF2BQ02080 365 aaPredicted RBP10.57□□□□□ -0.72
COL9A1-204ENST00000370496 C2CD4CQ8TF44 421 aa10.57□□□□□ -0.72
COL9A1-204ENST00000370496 TXNDC17Q9BRA2 123 aa10.57□□□□□ -0.72
COL9A1-204ENST00000370496 TP53TG3Q9ULZ0 132 aa10.57□□□□□ -0.72
COL9A1-204ENST00000370496 PFN1P07737 140 aaKnown RBP10.56□□□□□ -0.72
COL9A1-204ENST00000370496 TAGLN2P37802 199 aaKnown RBP10.56□□□□□ -0.72
COL9A1-204ENST00000370496 TMEM183BQ1AE95 376 aa10.56□□□□□ -0.72
COL9A1-204ENST00000370496 IBA57Q5T440 356 aaKnown RBP10.56□□□□□ -0.72
COL9A1-204ENST00000370496 TMEM183AQ8IXX5 376 aa10.56□□□□□ -0.72
COL9A1-204ENST00000370496 C11orf72Q8NBR9 251 aa10.56□□□□□ -0.72
COL9A1-204ENST00000370496 SDF2L1Q9HCN8 221 aa10.56□□□□□ -0.72
COL9A1-204ENST00000370496 ZFP30Q9Y2G7 519 aa10.56□□□□□ -0.72
COL9A1-204ENST00000370496 KLF12Q9Y4X4 402 aa10.56□□□□□ -0.72
COL9A1-204ENST00000370496 LTAP01374 205 aa10.55□□□□□ -0.72
COL9A1-204ENST00000370496 S100A9P06702 114 aaKnown RBP10.55□□□□□ -0.72
COL9A1-204ENST00000370496 ZNF80P51504 273 aaPredicted RBP10.55□□□□□ -0.72
COL9A1-204ENST00000370496 TCL1AP56279 114 aa10.55□□□□□ -0.72
COL9A1-204ENST00000370496 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
COL9A1-204ENST00000370496 VAX2Q9UIW0 290 aa10.55□□□□□ -0.72
COL9A1-204ENST00000370496 TRBV6-1A0A0K0K1D8 114 aa10.54□□□□□ -0.72
COL9A1-204ENST00000370496 IGLL5B9A064 214 aa10.54□□□□□ -0.72
COL9A1-204ENST00000370496 PDE6DO43924 150 aa10.54□□□□□ -0.72
COL9A1-204ENST00000370496 DAZ2Q13117 558 aaKnown RBP10.54□□□□□ -0.72
COL9A1-204ENST00000370496 TDRG1Q3Y452 100 aa10.54□□□□□ -0.72
COL9A1-204ENST00000370496 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms