RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 KLF12Q9Y4X4 402 aa11.28□□□□□ -0.6
PRPF38B-202ENST00000370022 C7orf71A4D174 169 aa11.27□□□□□ -0.61
PRPF38B-202ENST00000370022 KRBOX1C9JBD0 128 aa11.27□□□□□ -0.61
PRPF38B-202ENST00000370022 PDE6DO43924 150 aa11.27□□□□□ -0.61
PRPF38B-202ENST00000370022 S100A9P06702 114 aaKnown RBP11.27□□□□□ -0.61
PRPF38B-202ENST00000370022 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.27□□□□□ -0.61
PRPF38B-202ENST00000370022 IGHV3OR16-12A0A075B7B8 117 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 TRBV6-1A0A0K0K1D8 114 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 H7BYZ3 331 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 SCO1O75880 301 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 UBE2G1P62253 170 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 COMMD7Q86VX2 200 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 NIPSNAP3BQ9BS92 247 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 TREM1Q9NP99 234 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 X6R8D5 127 aa11.26□□□□□ -0.61
PRPF38B-202ENST00000370022 LOC102723971A0A1B0GUV8 181 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 J3KRW8 73 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 AKR1C3P42330 323 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 KIR3DS1Q14943 382 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 TMEM183BQ1AE95 376 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 PRNTQ86SH4 94 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 C2CD4CQ8TF44 421 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 C11orf52Q96A22 123 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 SGK494Q96LW2 274 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 LINC00479Q96M42 142 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 C12orf57Q99622 126 aa11.25□□□□□ -0.61
PRPF38B-202ENST00000370022 TRAV12-3A0A0B4J271 114 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 SCO2A0A1W2PP80 73 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RBFOX3A6NFN3 312 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RBMY1A1P0DJD3 496 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RBMY1CP0DJD4 496 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RNASE4P34096 147 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 TAS2R60P59551 318 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RAB14P61106 215 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RBMY1FQ15415 496 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 Q86TA4 180 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 TVP23CQ96ET8 276 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 LINC01587Q99440 93 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 C11orf68Q9H3H3 251 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 ZFP30Q9Y2G7 519 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 TRAV34A0A0B4J273 112 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 ZNF324O75467 553 aaPredicted RBP11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 BTN1A1Q13410 526 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 RRN3P1Q2M238 152 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 Q6AWC8 147 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 Q8NAQ8 132 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 PYGO2Q9BRQ0 406 aa11.24□□□□□ -0.61
PRPF38B-202ENST00000370022 HUWE1Q7Z6Z7 4374 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-202ENST00000370022 NDUFS6O75380 124 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-202ENST00000370022 ZNF506Q5JVG8 444 aa11.23□□□□□ -0.61
PRPF38B-202ENST00000370022 PRR9Q5T870 116 aa11.23□□□□□ -0.61
PRPF38B-202ENST00000370022 CLRN3Q8NCR9 226 aa11.23□□□□□ -0.61
PRPF38B-202ENST00000370022 LINC00467Q9BRT7 94 aa11.23□□□□□ -0.61
PRPF38B-202ENST00000370022 IGHV4-28A0A0C4DH34 117 aa11.22□□□□□ -0.61
PRPF38B-202ENST00000370022 TMEM189A5PLL7 270 aa11.22□□□□□ -0.61
PRPF38B-202ENST00000370022 LTAP01374 205 aa11.22□□□□□ -0.61
PRPF38B-202ENST00000370022 EIF5A2Q9GZV4 153 aaKnown RBP11.22□□□□□ -0.61
PRPF38B-202ENST00000370022 TRAV21A0A0B4J279 112 aa11.21□□□□□ -0.61
PRPF38B-202ENST00000370022 COX8CQ7Z4L0 72 aa11.21□□□□□ -0.61
PRPF38B-202ENST00000370022 PCNPQ8WW12 178 aaKnown RBP11.21□□□□□ -0.61
PRPF38B-202ENST00000370022 EDA2RQ9HAV5 297 aa11.21□□□□□ -0.61
PRPF38B-202ENST00000370022 A0A0J9YWU9 116 aa11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 TMEM250H0YL14 139 aa11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 RPL35P42766 123 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 ZNF493Q6ZR52 646 aa11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 C8orf49Q96NF6 230 aa11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 ZNF705GA8MUZ8 300 aaPredicted RBP11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 PFN1P07737 140 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 TMEM183AQ8IXX5 376 aa11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 EIF4E3Q8N5X7 224 aaKnown RBP11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 C16orf74Q96GX8 76 aa11.2□□□□□ -0.62
PRPF38B-202ENST00000370022 GCGP01275 180 aa11.19□□□□□ -0.62
PRPF38B-202ENST00000370022 HTN1P15515 57 aa11.19□□□□□ -0.62
PRPF38B-202ENST00000370022 ANXA2RQ3ZCQ2 193 aa11.19□□□□□ -0.62
PRPF38B-202ENST00000370022 BAGE2Q86Y30 109 aa11.19□□□□□ -0.62
PRPF38B-202ENST00000370022 TMEM263Q8WUH6 116 aaKnown RBP11.19□□□□□ -0.62
PRPF38B-202ENST00000370022 SMIM12Q96EX1 92 aa11.19□□□□□ -0.62
PRPF38B-202ENST00000370022 NBEAL2Q6ZNJ1 2754 aa11.18□□□□□ -0.62
PRPF38B-202ENST00000370022 IGHV1OR15-1A0A075B7D0 117 aa11.18□□□□□ -0.62
PRPF38B-202ENST00000370022 FAM159AQ6UWV7 190 aa11.18□□□□□ -0.62
PRPF38B-202ENST00000370022 WWC2-AS2Q96NR7 200 aa11.18□□□□□ -0.62
PRPF38B-202ENST00000370022 DERL1Q9BUN8 251 aa11.18□□□□□ -0.62
PRPF38B-202ENST00000370022 SMDT1Q9H4I9 107 aa11.18□□□□□ -0.62
PRPF38B-202ENST00000370022 COL7A1Q02388 2944 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 TEX48A0A1B0GUV7 120 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 CBY3A6NI87 242 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 DEFB4AO15263 64 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 SMIM6P0DI80 62 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 ZNF80P51504 273 aaPredicted RBP11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 TDRG1Q3Y452 100 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 RNASE8Q8TDE3 154 aaKnown RBP11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 KCNS1Q96KK3 526 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 BIN3Q9NQY0 253 aa11.17□□□□□ -0.62
PRPF38B-202ENST00000370022 AZU1P20160 251 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 PEA15Q15121 130 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 IL17DQ8TAD2 202 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 ZC2HC1AQ96GY0 325 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 MLST8Q9BVC4 326 aa11.16□□□□□ -0.62
PRPF38B-202ENST00000370022 S100A8P05109 93 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms