RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 SPINK13Q1W4C9 94 aa8.07□□□□□ -1.12
BRCC3-204ENST00000369462 PRR27Q6MZM9 219 aa8.07□□□□□ -1.12
BRCC3-204ENST00000369462 TRPT1Q86TN4 253 aaKnown RBP8.07□□□□□ -1.12
BRCC3-204ENST00000369462 ZC2HC1AQ96GY0 325 aa8.07□□□□□ -1.12
BRCC3-204ENST00000369462 CARHSP1Q9Y2V2 147 aaKnown RBP8.07□□□□□ -1.12
BRCC3-204ENST00000369462 GPX1P07203 203 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 RPL35AP18077 110 aaKnown RBP8.06□□□□□ -1.12
BRCC3-204ENST00000369462 ZFAND2AQ8N6M9 145 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 FAM19A4Q96LR4 140 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 SRD5A3Q9H8P0 318 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 LY96Q9Y6Y9 160 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 A8MTW9 85 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 GCGP01275 180 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 SMUG1Q53HV7 270 aa8.06□□□□□ -1.12
BRCC3-204ENST00000369462 TRAV12-2A0A075B6T6 113 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 M0R036 132 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 CRISP2P16562 243 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 CDKN1BP46527 198 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 PRR9Q5T870 116 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 SMIM12Q96EX1 92 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 ODF3Q96PU9 254 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 TRBV7-9A0A0J9YWB2 115 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 PRB2P02812 416 aaPredicted RBP8.05□□□□□ -1.12
BRCC3-204ENST00000369462 TSPOP30536 169 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 RNASE4P34096 147 aaKnown RBP8.05□□□□□ -1.12
BRCC3-204ENST00000369462 ZNF80P51504 273 aaPredicted RBP8.05□□□□□ -1.12
BRCC3-204ENST00000369462 TUBA4BQ9H853 241 aa8.05□□□□□ -1.12
BRCC3-204ENST00000369462 LEPP41159 167 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 CRIP1P50238 77 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 NUTF2P61970 127 aaKnown RBP8.04□□□□□ -1.12
BRCC3-204ENST00000369462 PNRC1Q12796 327 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-204ENST00000369462 LINC00322Q6ZN03 302 aaPredicted RBP8.04□□□□□ -1.12
BRCC3-204ENST00000369462 KLLNB2CW77 178 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 IGHV4-30-4P0DP06 118 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 BTN1A1Q13410 526 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 Q6ZQT7 251 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 COX8CQ7Z4L0 72 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 XCL2Q9UBD3 114 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 NBEAL2Q6ZNJ1 2754 aa8.04□□□□□ -1.12
BRCC3-204ENST00000369462 SVBPQ8N300 66 aa8.03□□□□□ -1.12
BRCC3-204ENST00000369462 RNASE7Q9H1E1 156 aaKnown RBP8.03□□□□□ -1.12
BRCC3-204ENST00000369462 ERVFC1-1P60608 527 aa8.03□□□□□ -1.12
BRCC3-204ENST00000369462 FAM162BQ5T6X4 162 aa8.03□□□□□ -1.12
BRCC3-204ENST00000369462 GFI1BQ5VTD9 330 aa8.03□□□□□ -1.12
BRCC3-204ENST00000369462 ISOC2Q96AB3 205 aa8.03□□□□□ -1.12
BRCC3-204ENST00000369462 DNAH3Q8TD57 4116 aa8.03□□□□□ -1.12
BRCC3-204ENST00000369462 TRAV12-3A0A0B4J271 114 aa8.02□□□□□ -1.12
BRCC3-204ENST00000369462 CRXO43186 299 aaPredicted RBP8.02□□□□□ -1.12
BRCC3-204ENST00000369462 PFN1P07737 140 aaKnown RBP8.02□□□□□ -1.12
BRCC3-204ENST00000369462 DAZAP1Q96EP5 407 aaKnown RBP8.02□□□□□ -1.12
BRCC3-204ENST00000369462 BIN3Q9NQY0 253 aa8.02□□□□□ -1.12
BRCC3-204ENST00000369462 FABP5P3A8MUU1 101 aa8.02□□□□□ -1.13
BRCC3-204ENST00000369462 S100A1P23297 94 aa8.02□□□□□ -1.13
BRCC3-204ENST00000369462 IBA57Q5T440 356 aaKnown RBP8.02□□□□□ -1.13
BRCC3-204ENST00000369462 KPRPQ5T749 579 aaPredicted RBP8.02□□□□□ -1.13
BRCC3-204ENST00000369462 SFRP2Q96HF1 295 aa8.02□□□□□ -1.13
BRCC3-204ENST00000369462 LOC102724200A0A096LPH7 203 aaPredicted RBP8.02□□□□□ -1.13
BRCC3-204ENST00000369462 C7orf71A4D174 169 aa8.02□□□□□ -1.13
BRCC3-204ENST00000369462 SH2D1AO60880 128 aa8.02□□□□□ -1.13
BRCC3-204ENST00000369462 TNFRSF6BO95407 300 aa8.02□□□□□ -1.13
BRCC3-204ENST00000369462 SNAPINO95295 136 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 CA1P00915 261 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-204ENST00000369462 GIG44P09565 113 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-204ENST00000369462 NUDT10Q8NFP7 164 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 NUDT11Q96G61 164 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 CSTL1Q9H114 145 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 PGPEP1Q9NXJ5 209 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 TRAV21A0A0B4J279 112 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 C19orf71A6NCJ1 209 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 P01737 135 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 RNF212Q495C1 297 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 Q6AWC8 147 aa8.01□□□□□ -1.13
BRCC3-204ENST00000369462 MORN3Q6PF18 240 aaPredicted RBP8.01□□□□□ -1.13
BRCC3-204ENST00000369462 C7orf77A4D0Y5 90 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 ZNF324O75467 553 aaPredicted RBP8□□□□□ -1.13
BRCC3-204ENST00000369462 ORM1P02763 201 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 C15orf54Q8N8G6 183 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 C11orf21Q9P2W6 132 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 NAGKQ9UJ70 344 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 B4DEV8 164 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 AMBPP02760 352 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 RBMY1A1P0DJD3 496 aaKnown RBP8□□□□□ -1.13
BRCC3-204ENST00000369462 RBMY1CP0DJD4 496 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 RBMY1FQ15415 496 aaKnown RBP8□□□□□ -1.13
BRCC3-204ENST00000369462 MUC21Q5SSG8 566 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 ATRAIDQ6UW56 229 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 OR10G8Q8NGN5 311 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 RPS10P5Q9NQ39 176 aa8□□□□□ -1.13
BRCC3-204ENST00000369462 ZNF705GA8MUZ8 300 aaPredicted RBP7.99□□□□□ -1.13
BRCC3-204ENST00000369462 INSP01308 110 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 MT-ND4LP03901 98 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 RPL19P84098 196 aaKnown RBP7.99□□□□□ -1.13
BRCC3-204ENST00000369462 FAM231DQ6ZW35 169 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 C1QTNF4Q9BXJ3 329 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 OSTCQ9NRP0 149 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 IGHV3OR16-12A0A075B7B8 117 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 TMSB15BA0A087X1C1 80 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 GATCO43716 136 aaKnown RBP7.99□□□□□ -1.13
BRCC3-204ENST00000369462 RHEBQ15382 184 aa7.99□□□□□ -1.13
BRCC3-204ENST00000369462 OR2D3Q8NGH3 330 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms