RNA–Protein interactions for RNA: ENST00000369448.3

FAM46C-201, Transcript of Putative nucleotidyltransferase FAM46C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM46C, Length 5,751 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM46C-201ENST00000369448 TSSC4Q9Y5U2 329 aaPredicted RBP11.78□□□□□ -0.52
FAM46C-201ENST00000369448 CENPFP49454 3210 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 P0C879 139 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 PROP1O75360 226 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 STHQ8IWL8 128 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 C11orf44Q8N8P7 122 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 YPEL4Q96NS1 127 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 SPINK8P0C7L1 97 aa11.78□□□□□ -0.52
FAM46C-201ENST00000369448 C9JAW5 83 aa11.77□□□□□ -0.52
FAM46C-201ENST00000369448 GTSF1Q8WW33 167 aa11.77□□□□□ -0.52
FAM46C-201ENST00000369448 RUSC1-AS1Q66K80 236 aa11.77□□□□□ -0.52
FAM46C-201ENST00000369448 NEGR1Q7Z3B1 354 aa11.77□□□□□ -0.52
FAM46C-201ENST00000369448 E7EUB6 86 aa11.77□□□□□ -0.53
FAM46C-201ENST00000369448 UBE2E1P51965 193 aa11.77□□□□□ -0.53
FAM46C-201ENST00000369448 IGHV2-70DA0A0C4DH43 119 aa11.77□□□□□ -0.53
FAM46C-201ENST00000369448 DAZ1Q9NQZ3 744 aaKnown RBP11.77□□□□□ -0.53
FAM46C-201ENST00000369448 IGKV1-17P01599 117 aa11.77□□□□□ -0.53
FAM46C-201ENST00000369448 AMTNQ6UX39 209 aa11.77□□□□□ -0.53
FAM46C-201ENST00000369448 MRPL36Q9P0J6 103 aaKnown RBP11.77□□□□□ -0.53
FAM46C-201ENST00000369448 PTPRQQ9UMZ3 2332 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 WISP2O76076 250 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 MYMXA0A1B0GTQ4 84 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 H3BMG7 143 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 RNASE8Q8TDE3 154 aaKnown RBP11.76□□□□□ -0.53
FAM46C-201ENST00000369448 ANKRD39Q53RE8 183 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 PRADC1Q9BSG0 188 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 C2orf82Q6UX34 121 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 PRSS33Q8NF86 280 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
FAM46C-201ENST00000369448 GATA1P15976 413 aaPredicted RBP11.75□□□□□ -0.53
FAM46C-201ENST00000369448 ATXN8Q156A1 80 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 C1orf122Q6ZSJ8 110 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 SMIM2Q9BVW6 85 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 ADAMTS9Q9P2N4 1935 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 DYNAPQ8N1N2 210 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 C8orf31Q8N9H6 132 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 F8VRH5 84 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 MSMPQ1L6U9 139 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 CEND1Q8N111 149 aa11.75□□□□□ -0.53
FAM46C-201ENST00000369448 PIP4P2Q8N4L2 257 aa11.74□□□□□ -0.53
FAM46C-201ENST00000369448 PLXNB1O43157 2135 aa11.74□□□□□ -0.53
FAM46C-201ENST00000369448 SIVA1O15304 175 aa11.74□□□□□ -0.53
FAM46C-201ENST00000369448 TIMM21Q9BVV7 248 aa11.74□□□□□ -0.53
FAM46C-201ENST00000369448 LINC01545Q5VT33 79 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 ZNF503Q96F45 646 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 MSRB1Q9NZV6 116 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 TMEM131Q92545 1883 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 A0A1W2PNU3 283 aaPredicted RBP11.73□□□□□ -0.53
FAM46C-201ENST00000369448 F8W1H4 67 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 CDKN1BP46527 198 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 MORN3Q6PF18 240 aaPredicted RBP11.73□□□□□ -0.53
FAM46C-201ENST00000369448 AGPAT4-IT1Q9H0P7 198 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 SDHAF1A6NFY7 115 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 I3L2K1 104 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 PMVKQ15126 192 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 PHLDA1Q8WV24 401 aaPredicted RBP11.73□□□□□ -0.53
FAM46C-201ENST00000369448 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 K7EIM0 57 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 HLA-DRB4P13762 266 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 HLA-DRB4X5D2U9 266 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 LTBP2Q14767 1821 aa11.73□□□□□ -0.53
FAM46C-201ENST00000369448 ADARB2-AS1A8MUL3 147 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 SPRY2O43597 315 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 PF4P02776 101 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 SYNJ2BPP57105 145 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 UTF1Q5T230 341 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 RBMY1BA6NDE4 496 aaKnown RBP11.72□□□□□ -0.53
FAM46C-201ENST00000369448 RBMY1EA6NEQ0 496 aaKnown RBP11.72□□□□□ -0.53
FAM46C-201ENST00000369448 RBMY1DP0C7P1 496 aaKnown RBP11.72□□□□□ -0.53
FAM46C-201ENST00000369448 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
FAM46C-201ENST00000369448 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 LY6G5BQ8NDX9 201 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 SCRT2Q9NQ03 307 aa11.72□□□□□ -0.53
FAM46C-201ENST00000369448 TRGV4A0A0C4DH28 118 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 SPINK13Q1W4C9 94 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 KLF12Q9Y4X4 402 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 CFHR4Q92496 578 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 SPRY4Q9C004 299 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 IGHV3-53P01767 116 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 C1orf159Q96HA4 380 aa11.71□□□□□ -0.53
FAM46C-201ENST00000369448 SHISA9B4DS77 424 aa11.71□□□□□ -0.54
FAM46C-201ENST00000369448 B4DSR2 109 aa11.71□□□□□ -0.54
FAM46C-201ENST00000369448 LINC00158P58513 81 aa11.71□□□□□ -0.54
FAM46C-201ENST00000369448 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.54
FAM46C-201ENST00000369448 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.54
FAM46C-201ENST00000369448 FOXE3Q13461 319 aa11.71□□□□□ -0.54
FAM46C-201ENST00000369448 TRGV1A0A0A0MS02 117 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 KLK9Q9UKQ9 250 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 A0A087WX48 190 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 TRPT1Q86TN4 253 aaKnown RBP11.7□□□□□ -0.54
FAM46C-201ENST00000369448 ACACBO00763 2458 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 IGFL2Q6UWQ7 119 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 ZNF415Q09FC8 603 aa11.7□□□□□ -0.54
FAM46C-201ENST00000369448 GNLYP22749 145 aa11.69□□□□□ -0.54
FAM46C-201ENST00000369448 ZNF625Q96I27 306 aaPredicted RBP11.69□□□□□ -0.54
FAM46C-201ENST00000369448 TRAV13-1A0A0B4J241 112 aa11.69□□□□□ -0.54
FAM46C-201ENST00000369448 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
FAM46C-201ENST00000369448 SAP30O75446 220 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms