RNA–Protein interactions for RNA: ENST00000369091.6

PRDM1-202, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 2,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-202ENST00000369091 TEX36Q5VZQ5 186 aa14.53□□□□□ -0.08
PRDM1-202ENST00000369091 SCGB1D4Q6XE38 83 aa14.53□□□□□ -0.08
PRDM1-202ENST00000369091 VKORC1Q9BQB6 163 aa14.53□□□□□ -0.08
PRDM1-202ENST00000369091 PRADC1Q9BSG0 188 aa14.53□□□□□ -0.08
PRDM1-202ENST00000369091 CD40P25942 277 aa14.52□□□□□ -0.08
PRDM1-202ENST00000369091 RPL32P62910 135 aaKnown RBP14.52□□□□□ -0.08
PRDM1-202ENST00000369091 ERCC8Q13216 396 aa14.52□□□□□ -0.08
PRDM1-202ENST00000369091 LYPD2Q6UXB3 125 aa14.52□□□□□ -0.08
PRDM1-202ENST00000369091 NRACQ8N912 160 aa14.52□□□□□ -0.08
PRDM1-202ENST00000369091 FAM110AQ9BQ89 295 aa14.52□□□□□ -0.08
PRDM1-202ENST00000369091 CRLF1O75462 422 aa14.52□□□□□ -0.09
PRDM1-202ENST00000369091 PPP1R27Q86WC6 154 aa14.52□□□□□ -0.09
PRDM1-202ENST00000369091 CNFNQ9BYD5 112 aa14.52□□□□□ -0.09
PRDM1-202ENST00000369091 ZDBF2Q9HCK1 2354 aa14.51□□□□□ -0.09
PRDM1-202ENST00000369091 TRAV4A0A0B4J268 109 aa14.51□□□□□ -0.09
PRDM1-202ENST00000369091 NDUFV3P56181 108 aaKnown RBP14.51□□□□□ -0.09
PRDM1-202ENST00000369091 C1orf210Q8IVY1 113 aa14.51□□□□□ -0.09
PRDM1-202ENST00000369091 COX8CQ7Z4L0 72 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 LINC00311Q8N616 119 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 KLHL30-AS1Q8NEE0 82 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 RHODO00212 210 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 SLC25A16P16260 332 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 PDE6HQ13956 83 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 CFHR4Q92496 578 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 DMXL2Q8TDJ6 3036 aa14.5□□□□□ -0.09
PRDM1-202ENST00000369091 BRI3O95415 125 aa14.49□□□□□ -0.09
PRDM1-202ENST00000369091 CD7P09564 240 aa14.49□□□□□ -0.09
PRDM1-202ENST00000369091 COL27A1Q8IZC6 1860 aaPredicted RBP14.49□□□□□ -0.09
PRDM1-202ENST00000369091 SRD5A1P18405 259 aa14.49□□□□□ -0.09
PRDM1-202ENST00000369091 PRSS33Q8NF86 280 aa14.49□□□□□ -0.09
PRDM1-202ENST00000369091 CSMD1Q96PZ7 3565 aa14.49□□□□□ -0.09
PRDM1-202ENST00000369091 NDUFA11Q86Y39 141 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE12JA6NER3 117 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE7O76087 117 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 IGHG4P01861 327 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE12FP0CL80 117 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE12GP0CL81 117 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE12IP0CL82 117 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE2BQ13066 116 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE4Q13068 117 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE2EQ4V326 116 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 SBSPONQ8IVN8 264 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 OR11H6Q8NGC7 330 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 GAGE2DQ9UEU5 116 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 MALRD1Q5VYJ5 2156 aa14.48□□□□□ -0.09
PRDM1-202ENST00000369091 IGHV3OR16-8A0A075B7F1 116 aa14.47□□□□□ -0.09
PRDM1-202ENST00000369091 TRAV8-2A0A0B4J237 113 aa14.47□□□□□ -0.09
PRDM1-202ENST00000369091 TMEM95Q3KNT9 176 aa14.47□□□□□ -0.09
PRDM1-202ENST00000369091 CACNA1GO43497 2377 aa14.47□□□□□ -0.09
PRDM1-202ENST00000369091 CRIP2P52943 208 aaPredicted RBP14.47□□□□□ -0.09
PRDM1-202ENST00000369091 SCGB3A1Q96QR1 104 aa14.47□□□□□ -0.09
PRDM1-202ENST00000369091 VCX2Q9H322 139 aa14.47□□□□□ -0.09
PRDM1-202ENST00000369091 FABP5P3A8MUU1 101 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 PRAC2D3DTV9 90 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 DYNAPQ8N1N2 210 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 TMEM190Q8WZ59 177 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 C11orf21Q9P2W6 132 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 TRAV12-1A0A0B4J245 112 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 IGHV3-23P01764 117 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 SCGB1C2P0DMR2 95 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 C3orf36Q3SXR2 165 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 C22orf34Q6ZV56 151 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 IGFBPL1Q8WX77 278 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 SIT1Q9Y3P8 196 aa14.46□□□□□ -0.09
PRDM1-202ENST00000369091 IGKV3D-20A0A0C4DH25 116 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 TMEM262E9PQX1 116 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 SNCGO76070 127 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 GFRALQ6UXV0 394 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 IL17RELQ6ZVW7 336 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 ROS1P08922 2347 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 IGHG3P01860 377 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 IGHV1-8P0DP01 117 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 DLX6P56179 175 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 RASL10AQ92737 203 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 LPAL2Q16609 132 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 Q6ZQT7 251 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 NEXN-AS1Q8NBZ9 246 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 SMAD5-AS1Q9Y6J3 95 aa14.45□□□□□ -0.1
PRDM1-202ENST00000369091 LOXP28300 417 aaPredicted RBP14.44□□□□□ -0.1
PRDM1-202ENST00000369091 LYRM7Q5U5X0 104 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 TRPT1Q86TN4 253 aaKnown RBP14.44□□□□□ -0.1
PRDM1-202ENST00000369091 ONECUT1Q9UBC0 465 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 CFC1BP0CG36 223 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 CFC1P0CG37 223 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 COX6B1P14854 86 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 ZNF474Q6S9Z5 364 aaPredicted RBP14.44□□□□□ -0.1
PRDM1-202ENST00000369091 FAM159AQ6UWV7 190 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 Q6ZS46 218 aa14.44□□□□□ -0.1
PRDM1-202ENST00000369091 IGHV1-3A0A0C4DH29 117 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 C9JAW5 83 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 NDUFB3O43676 98 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 TTC32Q5I0X7 151 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 SLC25A20O43772 301 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 IFITM1P13164 125 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 EMP1P54849 157 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 SEM1Q6ZVN7 128 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 C8orf31Q8N9H6 132 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 CCL17Q92583 94 aa14.43□□□□□ -0.1
PRDM1-202ENST00000369091 SPRY2O43597 315 aa14.42□□□□□ -0.1
PRDM1-202ENST00000369091 RNF182Q8N6D2 247 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms