RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 IGLV3-9A0A075B6K5 115 aa14.4□□□□□ -0.1
SNX27-202ENST00000368841 TSSC4Q9Y5U2 329 aaPredicted RBP14.4□□□□□ -0.1
SNX27-202ENST00000368841 CFHR4Q92496 578 aa14.4□□□□□ -0.1
SNX27-202ENST00000368841 ZNF524Q96C55 264 aa14.4□□□□□ -0.1
SNX27-202ENST00000368841 LY96Q9Y6Y9 160 aa14.4□□□□□ -0.1
SNX27-202ENST00000368841 K7EMI3 77 aa14.4□□□□□ -0.1
SNX27-202ENST00000368841 PDE6HQ13956 83 aa14.4□□□□□ -0.1
SNX27-202ENST00000368841 MRPL35Q9NZE8 188 aaKnown RBP14.4□□□□□ -0.1
SNX27-202ENST00000368841 DEFB4AO15263 64 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 DKK2Q9UBU2 259 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 WT1-ASQ06250 92 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 POLEQ07864 2286 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 K7EM74 188 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 NDUFA4O00483 81 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 SMIM2Q9BVW6 85 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 TIMM17AQ99595 171 aa14.39□□□□□ -0.11
SNX27-202ENST00000368841 CARD19Q96LW7 228 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 PRR25Q96S07 402 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 FRMPD3Q5JV73 1810 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 DOCK11Q5JSL3 2073 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 IGHV7-4-1A0A0J9YVY3 117 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 PROK2Q9HC23 129 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 DOCK9Q9BZ29 2069 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 GATA3P23771 443 aa14.38□□□□□ -0.11
SNX27-202ENST00000368841 CCL24O00175 119 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 FHL1Q13642 323 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 C15orf53Q8NAA6 179 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 C5orf38Q86SI9 138 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 CEND1Q8N111 149 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 RHODO00212 210 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 YPEL3P61236 119 aaPredicted RBP14.37□□□□□ -0.11
SNX27-202ENST00000368841 C5orf47Q569G3 176 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 DYNAPQ8N1N2 210 aa14.37□□□□□ -0.11
SNX27-202ENST00000368841 LY6G6EA0A0G2JKS1 128 aa14.36□□□□□ -0.11
SNX27-202ENST00000368841 U3KQA8 63 aa14.36□□□□□ -0.11
SNX27-202ENST00000368841 IGHV4-38-2P0DP08 117 aa14.36□□□□□ -0.11
SNX27-202ENST00000368841 Q6ZWC4 215 aa14.36□□□□□ -0.11
SNX27-202ENST00000368841 RITA1Q96K30 269 aa14.36□□□□□ -0.11
SNX27-202ENST00000368841 UBL5Q9BZL1 73 aa14.36□□□□□ -0.11
SNX27-202ENST00000368841 GATA1P15976 413 aaPredicted RBP14.35□□□□□ -0.11
SNX27-202ENST00000368841 ZNF492Q9P255 531 aa14.35□□□□□ -0.11
SNX27-202ENST00000368841 V9GYV3 84 aa14.35□□□□□ -0.11
SNX27-202ENST00000368841 LYL1P12980 280 aa14.35□□□□□ -0.11
SNX27-202ENST00000368841 VOPP1Q96AW1 172 aa14.35□□□□□ -0.11
SNX27-202ENST00000368841 BUB3O43684 328 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 FOXL2NBQ6ZUU3 175 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 TRIOBPQ9H2D6 2365 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 DOCK7Q96N67 2140 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 NCR3O14931 201 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 WFDC11Q8NEX6 87 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 ARFGEF3Q5TH69 2177 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 SMIM27A0A1W2PRY6 76 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 KIAA1671Q9BY89 1806 aa14.34□□□□□ -0.11
SNX27-202ENST00000368841 WIPF2Q8TF74 440 aaPredicted RBP14.34□□□□□ -0.11
SNX27-202ENST00000368841 H3BMG7 143 aa14.33□□□□□ -0.11
SNX27-202ENST00000368841 MRPL53Q96EL3 112 aaKnown RBP14.33□□□□□ -0.11
SNX27-202ENST00000368841 AMTNQ6UX39 209 aa14.33□□□□□ -0.12
SNX27-202ENST00000368841 SHISA9B4DS77 424 aa14.33□□□□□ -0.12
SNX27-202ENST00000368841 Q8TCH9 128 aa14.33□□□□□ -0.12
SNX27-202ENST00000368841 RMI2Q96E14 147 aa14.33□□□□□ -0.12
SNX27-202ENST00000368841 THSD7BQ9C0I4 1608 aa14.33□□□□□ -0.12
SNX27-202ENST00000368841 FXYD5Q96DB9 178 aa14.33□□□□□ -0.12
SNX27-202ENST00000368841 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
SNX27-202ENST00000368841 BOD1L2Q8IYS8 172 aa14.32□□□□□ -0.12
SNX27-202ENST00000368841 RPL39LQ96EH5 51 aaKnown RBP14.32□□□□□ -0.12
SNX27-202ENST00000368841 C9orf118A6NHY6 69 aa14.32□□□□□ -0.12
SNX27-202ENST00000368841 FNDC10F2Z333 226 aa14.32□□□□□ -0.12
SNX27-202ENST00000368841 TRACP01848 142 aa14.32□□□□□ -0.12
SNX27-202ENST00000368841 F8W735 103 aaPredicted RBP14.32□□□□□ -0.12
SNX27-202ENST00000368841 C15orf65H3BRN8 121 aa14.31□□□□□ -0.12
SNX27-202ENST00000368841 K7EN84 100 aa14.31□□□□□ -0.12
SNX27-202ENST00000368841 NBL1P41271 181 aa14.31□□□□□ -0.12
SNX27-202ENST00000368841 MGAMO43451 1857 aa14.31□□□□□ -0.12
SNX27-202ENST00000368841 NPBQ8NG41 125 aa14.31□□□□□ -0.12
SNX27-202ENST00000368841 CEP290O15078 2479 aa14.31□□□□□ -0.12
SNX27-202ENST00000368841 AKAP6Q13023 2319 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 Q9H8V8 135 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 Q6ZS49 121 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 FAM215AQ9Y5M1 114 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 GYPEP15421 78 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 HERVK_113P63121 156 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 CITED1Q99966 193 aa14.3□□□□□ -0.12
SNX27-202ENST00000368841 DOCK8Q8NF50 2099 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 IGLL1P15814 213 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 J3QQQ9 107 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 Q6ZVH6 145 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 Q0VG73 95 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 PIFOQ8TCI5 191 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 NPSP0C0P6 89 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 INAFM2P0DMQ5 153 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 CRYBA4P53673 196 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 ETDBQ3ZM63 59 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 IGHV4-30-2A0A087WSY4 118 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 EGR2P11161 476 aaPredicted RBP14.29□□□□□ -0.12
SNX27-202ENST00000368841 DAND5Q8N907 189 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 IGLC2P0DOY2 106 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 IGLC3P0DOY3 106 aa14.29□□□□□ -0.12
SNX27-202ENST00000368841 TIRAPP58753 221 aa14.28□□□□□ -0.12
SNX27-202ENST00000368841 SIP14410 1827 aa14.28□□□□□ -0.12
SNX27-202ENST00000368841 INTS1Q8N201 2190 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms