RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 PLNP26678 52 aa13.52□□□□□ -0.24
CHTOP-203ENST00000368690 GRNP28799 593 aaKnown RBP13.52□□□□□ -0.24
CHTOP-203ENST00000368690 CDSNQ15517 529 aa13.52□□□□□ -0.24
CHTOP-203ENST00000368690 RALYQ9UKM9 306 aaKnown RBP13.52□□□□□ -0.24
CHTOP-203ENST00000368690 ABCA1O95477 2261 aa13.52□□□□□ -0.24
CHTOP-203ENST00000368690 A0A087WX48 190 aa13.52□□□□□ -0.25
CHTOP-203ENST00000368690 GNLYP22749 145 aa13.52□□□□□ -0.25
CHTOP-203ENST00000368690 ZNF672Q499Z4 452 aaPredicted RBP13.52□□□□□ -0.25
CHTOP-203ENST00000368690 LINC01560Q8TB33 94 aa13.52□□□□□ -0.25
CHTOP-203ENST00000368690 MYOZ3Q8TDC0 251 aa13.52□□□□□ -0.25
CHTOP-203ENST00000368690 IGFBPL1Q8WX77 278 aa13.52□□□□□ -0.25
CHTOP-203ENST00000368690 H3BMG7 143 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 ETDBQ3ZM63 59 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 MAPKAPK5-AS1Q8N8E1 139 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 CFAP46Q8IYW2 2715 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 TRAV40A0A0B4J280 105 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 ORM1P02763 201 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 PRB4P10163 310 aaPredicted RBP13.51□□□□□ -0.25
CHTOP-203ENST00000368690 RNASE6Q93091 150 aaKnown RBP13.51□□□□□ -0.25
CHTOP-203ENST00000368690 TMEM160Q9NX00 188 aa13.51□□□□□ -0.25
CHTOP-203ENST00000368690 MRPL35Q9NZE8 188 aaKnown RBP13.51□□□□□ -0.25
CHTOP-203ENST00000368690 IGLV11-55A0A075B6I3 123 aa13.5□□□□□ -0.25
CHTOP-203ENST00000368690 TRBV7-3A0A075B6L6 115 aa13.5□□□□□ -0.25
CHTOP-203ENST00000368690 GAS8-AS1O95177 125 aa13.5□□□□□ -0.25
CHTOP-203ENST00000368690 DTX2Q86UW9 622 aa13.5□□□□□ -0.25
CHTOP-203ENST00000368690 ATP6V0E2Q8NHE4 81 aa13.5□□□□□ -0.25
CHTOP-203ENST00000368690 ROS1P08922 2347 aa13.5□□□□□ -0.25
CHTOP-203ENST00000368690 NCBP2LA6PVI3 153 aaKnown RBP13.49□□□□□ -0.25
CHTOP-203ENST00000368690 IGHG4P01861 327 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 LAGE3Q14657 143 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 IL17RELQ6ZVW7 336 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 NPBQ8NG41 125 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 Q8TAT8 98 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 HIVEP3Q5T1R4 2406 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 ZFYVE26Q68DK2 2539 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 TRAV12-1A0A0B4J245 112 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 RBAKDNA6NC62 111 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 NDUFA3O95167 84 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 SH2D6Q7Z4S9 175 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 HIST1H4GQ99525 98 aa13.49□□□□□ -0.25
CHTOP-203ENST00000368690 F8W735 103 aaPredicted RBP13.48□□□□□ -0.25
CHTOP-203ENST00000368690 NBR2O15453 112 aa13.48□□□□□ -0.25
CHTOP-203ENST00000368690 SCGB2A1O75556 95 aa13.48□□□□□ -0.25
CHTOP-203ENST00000368690 FANCD2OSQ96PS1 177 aa13.48□□□□□ -0.25
CHTOP-203ENST00000368690 LCNL1Q6ZST4 164 aa13.48□□□□□ -0.25
CHTOP-203ENST00000368690 EPG5Q9HCE0 2579 aa13.48□□□□□ -0.25
CHTOP-203ENST00000368690 MTURNQ8N3F0 131 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 MRAP2Q96G30 205 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 SMAD5-AS1Q9Y6J3 95 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 ANKHD1Q8IWZ3 2542 aaKnown RBP13.47□□□□□ -0.25
CHTOP-203ENST00000368690 CKS1BP61024 79 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 FBXL19-AS1Q494R0 122 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 NRACQ8N912 160 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 C21orf62Q9NYP8 219 aa13.47□□□□□ -0.25
CHTOP-203ENST00000368690 SPTBN1Q01082 2364 aaKnown RBP13.46□□□□□ -0.25
CHTOP-203ENST00000368690 TIMM23O14925 209 aa13.46□□□□□ -0.25
CHTOP-203ENST00000368690 RAB9AP51151 201 aa13.46□□□□□ -0.25
CHTOP-203ENST00000368690 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.45□□□□□ -0.26
CHTOP-203ENST00000368690 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.45□□□□□ -0.26
CHTOP-203ENST00000368690 H7C1H1 209 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 GATA1P15976 413 aaPredicted RBP13.45□□□□□ -0.26
CHTOP-203ENST00000368690 DYNLRB1Q9NP97 96 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 IGHV4-4A0A075B6R2 117 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 MYMXA0A1B0GTQ4 84 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 F8VRH5 84 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 PRB1P04280 392 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 CD3EP07766 207 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 DLX1P56177 255 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 AGRNO00468 2067 aa13.45□□□□□ -0.26
CHTOP-203ENST00000368690 COX7A1P24310 79 aa13.44□□□□□ -0.26
CHTOP-203ENST00000368690 C1QTNF4Q9BXJ3 329 aa13.44□□□□□ -0.26
CHTOP-203ENST00000368690 AMTNQ6UX39 209 aa13.44□□□□□ -0.26
CHTOP-203ENST00000368690 MRPL16Q9NX20 251 aaKnown RBP13.44□□□□□ -0.26
CHTOP-203ENST00000368690 PKDREJQ9NTG1 2253 aa13.43□□□□□ -0.26
CHTOP-203ENST00000368690 APOMO95445 188 aa13.43□□□□□ -0.26
CHTOP-203ENST00000368690 KLRD1Q13241 179 aa13.43□□□□□ -0.26
CHTOP-203ENST00000368690 SCGB2A2Q13296 93 aa13.43□□□□□ -0.26
CHTOP-203ENST00000368690 DYNAPQ8N1N2 210 aa13.43□□□□□ -0.26
CHTOP-203ENST00000368690 CFHR4Q92496 578 aa13.43□□□□□ -0.26
CHTOP-203ENST00000368690 OR11H12B2RN74 326 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 HOXA3O43365 443 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-203ENST00000368690 FOXI1Q12951 378 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 MORN3Q6PF18 240 aaPredicted RBP13.42□□□□□ -0.26
CHTOP-203ENST00000368690 OR11H1Q8NG94 326 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 OR11H2Q8NH07 326 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 S4R3C0 116 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 IGKV3D-20A0A0C4DH25 116 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 TMEM238LA0A1B0GVL6 79 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 K7EMI3 77 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 SLC25A16P16260 332 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 C5orf64Q2M2E5 130 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 CFAP126Q5VTH2 177 aa13.42□□□□□ -0.26
CHTOP-203ENST00000368690 A6NJY4 79 aa13.41□□□□□ -0.26
CHTOP-203ENST00000368690 DLX4Q92988 240 aaPredicted RBP13.41□□□□□ -0.26
CHTOP-203ENST00000368690 DPM3Q9P2X0 92 aa13.41□□□□□ -0.26
CHTOP-203ENST00000368690 E7EQL1 145 aa13.41□□□□□ -0.26
CHTOP-203ENST00000368690 CTSGP08311 255 aa13.41□□□□□ -0.26
CHTOP-203ENST00000368690 HLA-DMBP28068 263 aa13.41□□□□□ -0.26
CHTOP-203ENST00000368690 BBC3Q96PG8 261 aaPredicted RBP13.41□□□□□ -0.26
CHTOP-203ENST00000368690 SLC50A1Q9BRV3 221 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms