RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 STX12Q86Y82 276 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 ARPC5LQ9BPX5 153 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 GPN1Q9HCN4 374 aaPredicted RBP7.08□□□□□ -1.28
CLRN3-201ENST00000368671 LYRM2Q9NU23 88 aaPredicted RBP7.08□□□□□ -1.28
CLRN3-201ENST00000368671 TNFRSF18Q9Y5U5 241 aa7.08□□□□□ -1.28
CLRN3-201ENST00000368671 EPM2AB3EWF7 344 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 CRISP2P16562 243 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 ERVFC1-1P60608 527 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 PDE6HQ13956 83 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 IBA57Q5T440 356 aaKnown RBP7.07□□□□□ -1.28
CLRN3-201ENST00000368671 Q6ZQT7 251 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 C9orf47Q6ZRZ4 202 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 ST6GAL2Q96JF0 529 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 C8orf49Q96NF6 230 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 VGLL1Q99990 258 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 SLC25A2Q9BXI2 301 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 NUDT15Q9NV35 164 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 PRO0255Q9UI72 69 aa7.07□□□□□ -1.28
CLRN3-201ENST00000368671 IGHV1OR15-1A0A075B7D0 117 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 PRAF2O60831 178 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 CRYBA4P53673 196 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 ZNF415Q09FC8 603 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 ATP6V1FQ16864 119 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 LYPD5Q6UWN5 251 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 MIR17HGQ75NE6 70 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 ZFAND2AQ8N6M9 145 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 Q8TAT8 98 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 CHAC2Q8WUX2 184 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 NPCDR1Q9BY65 106 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 PTTG2Q9NZH5 202 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 ZNF492Q9P255 531 aa7.06□□□□□ -1.28
CLRN3-201ENST00000368671 DNAH5Q8TE73 4624 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 TRGV4A0A0C4DH28 118 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 NMBP08949 121 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 OR10J4P0C629 311 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 DNAH10OSP0CZ25 163 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 FHL2Q14192 279 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 MRPL23Q16540 153 aaKnown RBP7.05□□□□□ -1.28
CLRN3-201ENST00000368671 MUC21Q5SSG8 566 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 THAP6Q8TBB0 222 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 OR51M1Q9H341 326 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 HHLA3Q9XRX5 114 aa7.05□□□□□ -1.28
CLRN3-201ENST00000368671 E5RGE8 158 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 NBEAP1P0C6P0 100 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 ZNF138P52744 262 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 NHLH2Q02577 135 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 SLAQ13239 276 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 IL15RAQ13261 267 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 NEGR1Q7Z3B1 354 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 NFE4Q86UQ8 179 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 LYPD1Q8N2G4 141 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 PHYHIPLQ96FC7 376 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 FAM167A-AS1Q96KT0 104 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 PAXXQ9BUH6 204 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 LY96Q9Y6Y9 160 aa7.04□□□□□ -1.28
CLRN3-201ENST00000368671 TRAV9-2A0A087WT02 112 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 A0A087WTM6 91 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 SFTA3P0C7M3 94 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 INAFM2P0DMQ5 153 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 SRIP30626 198 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 XGP55808 180 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 WFDC10BQ8IUB3 73 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 OR5C1Q8NGR4 320 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 PCNPQ8WW12 178 aaKnown RBP7.03□□□□□ -1.28
CLRN3-201ENST00000368671 FXYD5Q96DB9 178 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 ZNF479Q96JC4 524 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 MRPL32Q9BYC8 188 aaKnown RBP7.03□□□□□ -1.28
CLRN3-201ENST00000368671 MDFICQ9P1T7 246 aa7.03□□□□□ -1.28
CLRN3-201ENST00000368671 FAM240BA0A1B0GVZ2 78 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 K7EQD1 137 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 OR7C2O60412 319 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 IFNA5P01569 189 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 CSN1S1P47710 185 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 LRRC37A5PQ49AS3 106 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 LCE4AQ5TA78 99 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 SLC25A31Q9H0C2 315 aa7.02□□□□□ -1.29
CLRN3-201ENST00000368671 C17orf112F2Z3M2 114 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 SIX6O95475 246 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 GYPEP15421 78 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 KRTAP10-1P60331 282 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 RANP62826 216 aaKnown RBP7.01□□□□□ -1.29
CLRN3-201ENST00000368671 ZNF266Q14584 549 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 TMEM183BQ1AE95 376 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 Q5VSD8 79 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 FAM159AQ6UWV7 190 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 TMEM183AQ8IXX5 376 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 FRZBQ92765 325 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 WDR61Q9GZS3 305 aaKnown RBP7.01□□□□□ -1.29
CLRN3-201ENST00000368671 KCNIP2Q9NS61 270 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 OR5AC2Q9NZP5 309 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 MSRB1Q9NZV6 116 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 NAGKQ9UJ70 344 aa7.01□□□□□ -1.29
CLRN3-201ENST00000368671 TRGV11A0A075B6L2 103 aa7□□□□□ -1.29
CLRN3-201ENST00000368671 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
CLRN3-201ENST00000368671 RBAKDNA6NC62 111 aa7□□□□□ -1.29
CLRN3-201ENST00000368671 ORM1P02763 201 aa7□□□□□ -1.29
CLRN3-201ENST00000368671 PLA2G1BP04054 148 aaKnown RBP7□□□□□ -1.29
CLRN3-201ENST00000368671 EVI2AP22794 236 aa7□□□□□ -1.29
CLRN3-201ENST00000368671 UBE2L3P68036 154 aaKnown RBP7□□□□□ -1.29
CLRN3-201ENST00000368671 OR10G4Q8NGN3 311 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms