RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 TINCRA0A1B0GVN0 87 aa10.02□□□□□ -0.81
TPR-201ENST00000367478 Q6P435 159 aa10.02□□□□□ -0.81
TPR-201ENST00000367478 GFI1Q99684 422 aa10.02□□□□□ -0.81
TPR-201ENST00000367478 ATP5G1P05496 136 aa10.02□□□□□ -0.81
TPR-201ENST00000367478 SLC25A29Q8N8R3 303 aa10.02□□□□□ -0.81
TPR-201ENST00000367478 TRAV3A0A0B4J244 114 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 C8orf31Q8N9H6 132 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 FAM110DQ8TAY7 271 aaPredicted RBP10.01□□□□□ -0.81
TPR-201ENST00000367478 LINC00473A8K010 186 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 TGFBR3LH3BV60 316 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 ANGP03950 147 aaKnown RBP10.01□□□□□ -0.81
TPR-201ENST00000367478 SH2D6Q7Z4S9 175 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 PCDH15Q96QU1 1955 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 NDUFA4O00483 81 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 TRBV19A0A075B6N1 114 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 IGHV2-70P01814 119 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 LYNX1G3V0Z9 82 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 LYNX1P0DP58 116 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 GGNQ86UU5 652 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 BAALCQ8WXS3 180 aa10.01□□□□□ -0.81
TPR-201ENST00000367478 A0A0B4J2C4 111 aa10□□□□□ -0.81
TPR-201ENST00000367478 SPINK13Q1W4C9 94 aa10□□□□□ -0.81
TPR-201ENST00000367478 MRPL35Q9NZE8 188 aaKnown RBP10□□□□□ -0.81
TPR-201ENST00000367478 GAFA1Q96PS6 74 aa10□□□□□ -0.81
TPR-201ENST00000367478 IGKV1-27A0A075B6S5 117 aa10□□□□□ -0.81
TPR-201ENST00000367478 UBE2E1P51965 193 aa10□□□□□ -0.81
TPR-201ENST00000367478 SIGLEC8Q9NYZ4 499 aa10□□□□□ -0.81
TPR-201ENST00000367478 COL11A2P13942 1736 aaPredicted RBP10□□□□□ -0.81
TPR-201ENST00000367478 CRYGCP07315 174 aa10□□□□□ -0.81
TPR-201ENST00000367478 C12orf74Q32Q52 190 aa10□□□□□ -0.81
TPR-201ENST00000367478 C8orf86Q6ZUL3 223 aa10□□□□□ -0.81
TPR-201ENST00000367478 CSPG4Q6UVK1 2322 aa10□□□□□ -0.81
TPR-201ENST00000367478 C9JQL5 133 aa10□□□□□ -0.81
TPR-201ENST00000367478 ZNRF2Q8NHG8 242 aa10□□□□□ -0.81
TPR-201ENST00000367478 B5MCH6 92 aa10□□□□□ -0.81
TPR-201ENST00000367478 RNF152Q8N8N0 203 aa10□□□□□ -0.81
TPR-201ENST00000367478 SVIPQ8NHG7 77 aa10□□□□□ -0.81
TPR-201ENST00000367478 OVOL3O00110 214 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 CFC1BP0CG36 223 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 CFC1P0CG37 223 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 DEFB104AQ8WTQ1 72 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 ZMAT4Q9H898 229 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 PRR25Q96S07 402 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 OTOGLQ3ZCN5 2332 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 TMEM213A2RRL7 107 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 NDUFA4L2Q9NRX3 87 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 NAV3Q8IVL0 2385 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 ADAMTS7Q9UKP4 1686 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 PSMB8P28062 276 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 XCL2Q9UBD3 114 aa9.99□□□□□ -0.81
TPR-201ENST00000367478 NXPH4O95158 308 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 LENEPQ9Y5L5 61 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 PROP1O75360 226 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 MST1LQ2TV78 715 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 ETDCA0A1B0GVM5 59 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 MESP1Q9BRJ9 268 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 JMJD7-PLA2G4BH0Y9G9 81 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 IGLL1P15814 213 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 ZFP36L1Q07352 338 aaKnown RBP9.98□□□□□ -0.81
TPR-201ENST00000367478 PRSS57Q6UWY2 283 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 C8orf49Q96NF6 230 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 TNRC6BQ9UPQ9 1833 aaKnown RBP9.98□□□□□ -0.81
TPR-201ENST00000367478 NPSP0C0P6 89 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 PDE6GP18545 87 aa9.98□□□□□ -0.81
TPR-201ENST00000367478 PLXNA4Q9HCM2 1894 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 ANXA2RQ3ZCQ2 193 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 VSIG2Q96IQ7 327 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 LYPD3O95274 346 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 ZFP2Q6ZN57 461 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 MRPL53Q96EL3 112 aaKnown RBP9.97□□□□□ -0.81
TPR-201ENST00000367478 LINC00479Q96M42 142 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 DKK4Q9UBT3 224 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 QRFPP83859 136 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 Q6ZWC4 215 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 FGFBP3Q8TAT2 258 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 V9GYV3 84 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 IGHV1-69DA0A0B4J2H0 117 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 OPRPNQ99935 248 aaPredicted RBP9.97□□□□□ -0.81
TPR-201ENST00000367478 SIP14410 1827 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 IGKV1-16P04430 117 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 DENND4CQ5VZ89 1909 aa9.97□□□□□ -0.81
TPR-201ENST00000367478 NREPQ16612 68 aa9.96□□□□□ -0.81
TPR-201ENST00000367478 C14orf132Q9NPU4 83 aa9.96□□□□□ -0.81
TPR-201ENST00000367478 MDS2Q8NDY4 140 aa9.96□□□□□ -0.81
TPR-201ENST00000367478 PNRC2Q9NPJ4 139 aaKnown RBP9.96□□□□□ -0.81
TPR-201ENST00000367478 K7ERS5 55 aa9.96□□□□□ -0.81
TPR-201ENST00000367478 SPACA3Q8IXA5 215 aa9.96□□□□□ -0.81
TPR-201ENST00000367478 NTN5Q8WTR8 489 aaPredicted RBP9.96□□□□□ -0.81
TPR-201ENST00000367478 RBAKDNA6NC62 111 aa9.96□□□□□ -0.82
TPR-201ENST00000367478 J3QLI3 93 aa9.96□□□□□ -0.82
TPR-201ENST00000367478 SONP18583 2426 aaKnown RBP9.96□□□□□ -0.82
TPR-201ENST00000367478 TFF1P04155 84 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 C4orf48Q5BLP8 95 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 BRD3OSQ6XYD6 125 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 IGKV1D-17A0A075B6S4 117 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 C5orf63A6NC05 138 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 BUB3O43684 328 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 IGHV3-16A0A0C4DH30 117 aa9.95□□□□□ -0.82
TPR-201ENST00000367478 MUSTN1Q8IVN3 82 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms