RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 DLX4Q92988 240 aaPredicted RBP9.13□□□□□ -0.95
SYNE1-204ENST00000367248 CHD3Q12873 2000 aaKnown RBP9.13□□□□□ -0.95
SYNE1-204ENST00000367248 LGALS1P09382 135 aaKnown RBP9.13□□□□□ -0.95
SYNE1-204ENST00000367248 SS18Q15532 418 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 TMEM86BQ8N661 226 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 C8orf49Q96NF6 230 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 GFRA4Q9GZZ7 299 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 NACAE9PAV3 2078 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 ZNF726P1Q15940 193 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 AMN1Q8IY45 258 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 ZNRF2Q8NHG8 242 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 PRR25Q96S07 402 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 CITED2Q99967 270 aaPredicted RBP9.13□□□□□ -0.95
SYNE1-204ENST00000367248 SLC25A2Q9BXI2 301 aa9.13□□□□□ -0.95
SYNE1-204ENST00000367248 TRAV9-2A0A087WT02 112 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 FAM231BA6NCW3 169 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 CBY1Q9Y3M2 126 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 IGHV1OR15-1A0A075B7D0 117 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 IGHV7-81A0A0B4J1V7 117 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 ZNF625Q96I27 306 aaPredicted RBP9.12□□□□□ -0.95
SYNE1-204ENST00000367248 IGKV2D-24A0A075B6R9 120 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 VWC2Q2TAL6 325 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 C10orf142B7Z368 130 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 GUSBP1Q15486 140 aa9.12□□□□□ -0.95
SYNE1-204ENST00000367248 IGLV1-47P01700 117 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 CDKN1BP46527 198 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 TEX43Q6ZNM6 134 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 IGKCP01834 107 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 NAV3Q8IVL0 2385 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 SEC11AP67812 179 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 CT83Q5H943 113 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 NPBQ8NG41 125 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 HIST1H2BLQ99880 126 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 C9JQL5 133 aa9.11□□□□□ -0.95
SYNE1-204ENST00000367248 ANGP03950 147 aaKnown RBP9.1□□□□□ -0.95
SYNE1-204ENST00000367248 LAMTOR2Q9Y2Q5 125 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 Q6ZQT7 251 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 TYMSP04818 313 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 GATD1Q8NB37 220 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 CEP295Q9C0D2 2601 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 GOLGB1Q14789 3259 aaKnown RBP9.1□□□□□ -0.95
SYNE1-204ENST00000367248 DNAJC9-AS1A6NH13 148 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 ADCYAP1P18509 176 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 Q8N7P7 452 aa9.1□□□□□ -0.95
SYNE1-204ENST00000367248 FOXE3Q13461 319 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 SPRY2O43597 315 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 TLN1Q9Y490 2541 aaKnown RBP9.09□□□□□ -0.95
SYNE1-204ENST00000367248 LTBP2Q14767 1821 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 CYYR1Q96J86 154 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 TMEM213A2RRL7 107 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 DEFB135Q30KP9 77 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 ANXA2RQ3ZCQ2 193 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 OR2K2Q8NGT1 345 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 HLA-DMBP28068 263 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 HIST3H2BBQ8N257 126 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 SPXQ9BT56 116 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 CLPSL1A2RUU4 121 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 PLNP26678 52 aa9.09□□□□□ -0.95
SYNE1-204ENST00000367248 VWC2LB2RUY7 222 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 ASPHD1Q5U4P2 390 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 ATP6V0BQ99437 205 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 MORN3Q6PF18 240 aaPredicted RBP9.08□□□□□ -0.96
SYNE1-204ENST00000367248 FAM231DQ6ZW35 169 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 RITA1Q96K30 269 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 TRBV25-1A0A075B6N4 114 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 PLP1P60201 277 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 TRPT1Q86TN4 253 aaKnown RBP9.08□□□□□ -0.96
SYNE1-204ENST00000367248 TMEM256Q8N2U0 113 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 C11orf52Q96A22 123 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 FXYD5Q96DB9 178 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 GSN-AS1Q9NRJ2 163 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 IGHV4OR15-8A0A075B7B6 117 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 A0A087WW49 117 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 DOCK11Q5JSL3 2073 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 TNFRSF6BO95407 300 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 PLA2G2AP14555 144 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 NEGR1Q7Z3B1 354 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
SYNE1-204ENST00000367248 SIRPDQ9H106 197 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 PRSS46E5RG02 174 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 F8W735 103 aaPredicted RBP9.07□□□□□ -0.96
SYNE1-204ENST00000367248 LY6G6DO95868 133 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 Q8N9W7 124 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 CDK2AP2O75956 126 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 TSPAN13O95857 204 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 AJUBAQ96IF1 538 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 CHD8Q9HCK8 2581 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 A8MWV9 139 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 IGKV1-17P01599 117 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 PFN2P35080 140 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 IGLV11-55A0A075B6I3 123 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 K7EIM0 57 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 NXPH4O95158 308 aa9.07□□□□□ -0.96
SYNE1-204ENST00000367248 IGLL5B9A064 214 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 FAM104BQ5XKR9 115 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 DENND4CQ5VZ89 1909 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 RASL10AQ92737 203 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 ZNF114Q8NC26 417 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 DOPEY1Q5JWR5 2465 aa9.06□□□□□ -0.96
SYNE1-204ENST00000367248 TRAV26-2A0A0B4J265 109 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms