RNA–Protein interactions for RNA: ENST00000366699.3

TRIM11-202, Transcript of tripartite motif containing 11, humanhuman

TSL 2 BASIC

Gene TRIM11, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-202ENST00000366699 SPOCK3Q9BQ16 436 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 ZFYVE26Q68DK2 2539 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 IGHV4-30-2A0A087WSY4 118 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 IGHV4-38-2P0DP08 117 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 DSCR9P59020 149 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 HIST1H1AQ02539 215 aaPredicted RBP13.41□□□□□ -0.26
TRIM11-202ENST00000366699 IL17RELQ6ZVW7 336 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 RNASE8Q8TDE3 154 aaKnown RBP13.41□□□□□ -0.26
TRIM11-202ENST00000366699 PSMG3-AS1Q96PY0 264 aa13.41□□□□□ -0.26
TRIM11-202ENST00000366699 SMKR1H3BMG3 65 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 C8orf86Q6ZUL3 223 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 NPFFR1Q9GZQ6 430 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 MSRB1Q9NZV6 116 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 ZFHX3Q15911 3703 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 IGHV3OR16-13A0A075B7E8 117 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 IGHV3-74A0A0B4J1X5 117 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 IGHG2P01859 326 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 BVES-AS1Q5T3Y7 98 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 RNF185Q96GF1 192 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 AGPAT4-IT1Q9H0P7 198 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 MAP1LC3AQ9H492 121 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 LINC00527Q9UJ94 153 aa13.4□□□□□ -0.26
TRIM11-202ENST00000366699 H3BUX3 64 aa13.39□□□□□ -0.27
TRIM11-202ENST00000366699 ZNF207O43670 478 aaKnown RBP13.39□□□□□ -0.27
TRIM11-202ENST00000366699 A6NDX4 124 aa13.39□□□□□ -0.27
TRIM11-202ENST00000366699 B4DSR2 109 aa13.39□□□□□ -0.27
TRIM11-202ENST00000366699 NDUFA4O00483 81 aa13.39□□□□□ -0.27
TRIM11-202ENST00000366699 LY6EQ16553 131 aa13.39□□□□□ -0.27
TRIM11-202ENST00000366699 PRSS57Q6UWY2 283 aa13.39□□□□□ -0.27
TRIM11-202ENST00000366699 IGHV3-49A0A0A0MS15 119 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 GATA3P23771 443 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 IFI27L1Q96BM0 104 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 C16orf92Q96LL3 132 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 TRAV8-2A0A0B4J237 113 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 C9orf139Q6ZV77 190 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 OR1N2Q8NGR9 330 aa13.38□□□□□ -0.27
TRIM11-202ENST00000366699 USP24Q9UPU5 2620 aa13.37□□□□□ -0.27
TRIM11-202ENST00000366699 LINC01546A6NGU7 62 aa13.37□□□□□ -0.27
TRIM11-202ENST00000366699 PPIFP30405 207 aaKnown RBP13.37□□□□□ -0.27
TRIM11-202ENST00000366699 C9orf47Q6ZRZ4 202 aa13.37□□□□□ -0.27
TRIM11-202ENST00000366699 NXT2Q9NPJ8 142 aaKnown RBP13.37□□□□□ -0.27
TRIM11-202ENST00000366699 IGKV3D-20A0A0C4DH25 116 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 FXYD7P58549 80 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 RBX1P62877 108 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 CACNG7P62955 275 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 DEFB125Q8N687 156 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 OR4C5Q8NGB2 326 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 GLMPQ8WWB7 406 aa13.36□□□□□ -0.27
TRIM11-202ENST00000366699 USP9XQ93008 2570 aaPredicted RBP13.36□□□□□ -0.27
TRIM11-202ENST00000366699 UTP20O75691 2785 aaKnown RBP13.35□□□□□ -0.27
TRIM11-202ENST00000366699 A0A0G2JLM5 398 aa13.35□□□□□ -0.27
TRIM11-202ENST00000366699 TNFRSF6BO95407 300 aa13.35□□□□□ -0.27
TRIM11-202ENST00000366699 VAMP3Q15836 100 aa13.35□□□□□ -0.27
TRIM11-202ENST00000366699 ERASQ7Z444 233 aa13.35□□□□□ -0.27
TRIM11-202ENST00000366699 LENEPQ9Y5L5 61 aa13.35□□□□□ -0.27
TRIM11-202ENST00000366699 K7EP13 123 aa13.34□□□□□ -0.27
TRIM11-202ENST00000366699 PF4V1P10720 104 aa13.34□□□□□ -0.27
TRIM11-202ENST00000366699 SLC25A16P16260 332 aa13.34□□□□□ -0.27
TRIM11-202ENST00000366699 C2orf91Q6ZV80 131 aa13.34□□□□□ -0.27
TRIM11-202ENST00000366699 SMIM15Q7Z3B0 74 aa13.34□□□□□ -0.27
TRIM11-202ENST00000366699 C11orf21Q9P2W6 132 aa13.34□□□□□ -0.27
TRIM11-202ENST00000366699 TAX1BP3O14907 124 aa13.33□□□□□ -0.28
TRIM11-202ENST00000366699 ANKRD39Q53RE8 183 aa13.33□□□□□ -0.28
TRIM11-202ENST00000366699 CRYBG3Q68DQ2 2970 aa13.33□□□□□ -0.28
TRIM11-202ENST00000366699 MYO18BQ8IUG5 2567 aa13.33□□□□□ -0.28
TRIM11-202ENST00000366699 CD5LO43866 347 aa13.33□□□□□ -0.28
TRIM11-202ENST00000366699 FCER1GP30273 86 aa13.33□□□□□ -0.28
TRIM11-202ENST00000366699 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
TRIM11-202ENST00000366699 FGF6P10767 208 aa13.32□□□□□ -0.28
TRIM11-202ENST00000366699 ABCA2Q9BZC7 2435 aa13.32□□□□□ -0.28
TRIM11-202ENST00000366699 UNQ9165/PRO28630Q6UXU0 137 aa13.32□□□□□ -0.28
TRIM11-202ENST00000366699 OR4X2Q8NGF9 303 aa13.32□□□□□ -0.28
TRIM11-202ENST00000366699 LINC00477Q96M19 166 aa13.32□□□□□ -0.28
TRIM11-202ENST00000366699 SPG11Q96JI7 2443 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 OVOL1O14753 267 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 GAS8-AS1O95177 125 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 LEPP41159 167 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 BLCAPP62952 87 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 BOD1L2Q8IYS8 172 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 IGHV7-4-1A0A0J9YVY3 117 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 SNAI2O43623 268 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 TRBV12-3P01733 135 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 PRB1P04280 392 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 OR10J6PQ8NGY7 276 aa13.31□□□□□ -0.28
TRIM11-202ENST00000366699 IGLV1-40P01703 118 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 EVI2AP22794 236 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 PSMG4Q5JS54 123 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 ZNF580Q9UK33 172 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 IGHV4-4A0A075B6R2 117 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 SMAD7O15105 426 aaKnown RBP13.3□□□□□ -0.28
TRIM11-202ENST00000366699 IGHV3-11P01762 117 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 SEC11AP67812 179 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 TMEM97Q5BJF2 176 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 Q8N8P6 123 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 LINC01356Q8N9X3 169 aa13.3□□□□□ -0.28
TRIM11-202ENST00000366699 CSMD2Q7Z408 3487 aa13.29□□□□□ -0.28
TRIM11-202ENST00000366699 OR9G4Q8NGQ1 327 aa13.29□□□□□ -0.28
TRIM11-202ENST00000366699 OR2K2Q8NGT1 345 aa13.29□□□□□ -0.28
TRIM11-202ENST00000366699 C18orf15Q96N68 181 aa13.29□□□□□ -0.28
TRIM11-202ENST00000366699 KLK15Q9H2R5 256 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms