RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 CEBPZOSA8MTT3 80 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 GABARAPH6UMI1 98 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 SSNA1O43805 119 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 MED6O75586 246 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 IGHV3-53P01767 116 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 TCRBP04435 133 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 IL5P05113 134 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 CRYGDP07320 174 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 HOXB5P09067 269 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 PGAM2P15259 253 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 CXCL3P19876 107 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 GATA2P23769 480 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 S100GP29377 79 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 CDKN1BP46527 198 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 FABP9Q0Z7S8 132 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 IL18Q14116 193 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 C21orf62-AS1Q17RA5 79 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 SAMD13Q5VXD3 122 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 ETFRF1Q6IPR1 90 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 TMUB2Q71RG4 321 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 BPIFCQ8NFQ6 507 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 OR52I2Q8NH67 350 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 CIRBP-AS1Q8TBR5 109 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 KRTAP3-1Q9BYR8 98 aa5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.59□□□□□ -1.51
HMGB1P39-201ENST00000366304 TRGV2A0A075B6R0 118 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 COLCA2A8K830 154 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 PRAC2D3DTV9 90 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 SMLR1H3BR10 107 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 CTDSPLO15194 276 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 CEBPGP53567 150 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 CRYBA4P53673 196 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 LHFPL1Q86WI0 220 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 SELENOHQ8IZQ5 122 aaKnown RBP5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 HSD17B11Q8NBQ5 300 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 SMIM4Q8WVI0 70 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 MTFP1Q9UDX5 166 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 FUT9Q9Y231 359 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 KLF12Q9Y4X4 402 aa5.58□□□□□ -1.52
HMGB1P39-201ENST00000366304 TRGV1A0A0A0MS02 117 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 SNURFLB1AK76 121 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 J3KRW8 73 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 M0R143 59 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 LECT2O14960 151 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 DLEU1O43261 78 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 PSCAO43653 123 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 GAS8-AS1O95177 125 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 CDS2O95674 445 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 TBPP20226 339 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 EVI2AP22794 236 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 BLOC1S1P78537 153 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 SSBP1Q04837 148 aaKnown RBP5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 FHL2Q14192 279 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 PSG3Q16557 428 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 MAJINQ3KP22 176 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 THAP8Q8NA92 274 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 OR2D3Q8NGH3 330 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 OR4D5Q8NGN0 318 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 OR1B1Q8NGR6 318 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 TRGV9Q99603 122 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 CHAC1Q9BUX1 264 aa5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 RCL1Q9Y2P8 373 aaKnown RBP5.57□□□□□ -1.52
HMGB1P39-201ENST00000366304 FAT4Q6V0I7 4981 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 TRAV12-3A0A0B4J271 114 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 H3BRN7 92 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 SPINK4O60575 86 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 IGLV2-8P01709 118 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 CD3DP04234 171 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 SNRPCP09234 159 aaKnown RBP5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 ORM2P19652 201 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 TAS2R19P59542 299 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 NEGR1Q7Z3B1 354 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 LGI3Q8N145 548 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 TMEM229BQ8NBD8 167 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 OR13C8Q8NGS7 320 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 RPUSD4Q96CM3 377 aaKnown RBP5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 TMEM222Q9H0R3 208 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 RBKSQ9H477 322 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 Q9HAA7 133 aa5.56□□□□□ -1.52
HMGB1P39-201ENST00000366304 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 ANKRD20A5PA0PJZ0 165 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 IBA57-AS1B1ANH7 110 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 K7EP13 123 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 K7EQD1 137 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 CT45A10P0DMU9 189 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 FGF7P21781 194 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 CCR6P51684 374 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 MRPL23Q16540 153 aaKnown RBP5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 FAM74A1Q5RGS3 127 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 STEAP1BQ6NZ63 245 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 Q6ZQT7 251 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 FAM219AQ8IW50 185 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 TOMM5Q8N4H5 51 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 LRTM2Q8N967 370 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 SLC35E1Q96K37 410 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 C20orf144Q9BQM9 153 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 ARL6Q9H0F7 186 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 MRPL16Q9NX20 251 aaKnown RBP5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 PRO0255Q9UI72 69 aa5.55□□□□□ -1.52
HMGB1P39-201ENST00000366304 HHLA3Q9XRX5 114 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms