RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 RNASEH2CQ8TDP1 164 aaKnown RBP-2.72□□□□□ -2.84
RNU6-340P-201ENST00000364005 ATG5Q9H1Y0 275 aa-2.72□□□□□ -2.84
RNU6-340P-201ENST00000364005 ENY2Q9NPA8 101 aa-2.72□□□□□ -2.84
RNU6-340P-201ENST00000364005 LINC00846Q9NV44 126 aa-2.72□□□□□ -2.84
RNU6-340P-201ENST00000364005 EXTL2Q9UBQ6 330 aa-2.72□□□□□ -2.84
RNU6-340P-201ENST00000364005 TMEM56-RWDD3S4R434 201 aa-2.72□□□□□ -2.84
RNU6-340P-201ENST00000364005 KDM3BQ7LBC6 1761 aa-2.72□□□□□ -2.85
RNU6-340P-201ENST00000364005 ERCC6L2Q5T890 1561 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 A0A1B0GW15 77 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 BBIP1A8MTZ0 92 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 CASQ2O14958 399 aaPredicted RBP-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 TNFAIP8O95379 198 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 HLA-DRB1P01911 266 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 IVLP07476 585 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 SMIM10L2AP0DMW4 78 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 SMIM10L2BP0DMW5 78 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 IDO1P14902 403 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 RSU1Q15404 277 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 EIF5AL1Q6IS14 154 aaKnown RBP-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 LINC00523Q86TU6 105 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 C20orf196Q8IYI0 205 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 PIGXQ8TBF5 258 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 AMELXQ99217 191 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 OR52A5Q9H2C5 316 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 PRTFDC1Q9NRG1 225 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 ENPP5Q9UJA9 477 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 LRP6O75581 1613 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 ARAP1Q96P48 1450 aa-2.73□□□□□ -2.85
RNU6-340P-201ENST00000364005 A0A1B0GV50 99 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 A0A1W2PPV4 95 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 ORM1P02763 201 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 SLC35E2BP0CK96 405 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 IL7P13232 177 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 SDC4P31431 198 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 CAPZBP47756 277 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 CDC34P49427 236 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 FADDQ13158 208 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 TMED1Q13445 227 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 ACOT6Q3I5F7 207 aaPredicted RBP-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 CLEC2AQ6UVW9 174 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 OR4S1Q8NGB4 309 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 DGCR14Q96DF8 476 aaKnown RBP-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 SLIT1O75093 1534 aa-2.74□□□□□ -2.85
RNU6-340P-201ENST00000364005 KDM5AP29375 1690 aaKnown RBP-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 ATP6V1G2O95670 118 aa-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 HLA-EP13747 358 aa-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 HSP90AA4PQ58FG1 418 aa-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 NPCDR1Q9BY65 106 aa-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 C20orf27Q9GZN8 174 aa-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 SCP2D1Q9UJQ7 156 aa-2.75□□□□□ -2.85
RNU6-340P-201ENST00000364005 ZNF609O15014 1411 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 C3orf85A0A1B0GTC6 90 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 GSTTP1A0A1W2PQM5 241 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 LYRM1O43325 122 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 MFSD11O43934 449 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 SSSCA1O60232 199 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 OTCP00480 354 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 S100A3P33764 101 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 AP3S2P59780 193 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 RPS20P60866 119 aaKnown RBP-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 TAF1AQ15573 450 aaPredicted RBP-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 VAMP3Q15836 100 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 SLC48A1Q6P1K1 146 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 TNFAIP8L2Q6P589 184 aaPredicted RBP-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 HRCT1Q6UXD1 115 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 OR4B1Q8NGF8 309 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 OR5A2Q8NGI9 324 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 SCN3BQ9NY72 215 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 HPCAL4Q9UM19 191 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 NUP155O75694 1391 aa-2.76□□□□□ -2.85
RNU6-340P-201ENST00000364005 DMDP11532 3685 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 FRMPD1Q5SYB0 1578 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 SPTBN5Q9NRC6 3674 aaKnown RBP-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 ARL5CA6NH57 179 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 J3QRK9 145 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 DEGS1O15121 323 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 LYPLA2O95372 231 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 RBP1P09455 135 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 HIST1H1TP22492 207 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 CLDN12P56749 244 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 PIGPP57054 158 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 ERVS71-1P61550 626 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 SNRPD2P62316 118 aaKnown RBP-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 DNM1P34Q6PK57 102 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 KRT222Q8N1A0 295 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 ANKRD29Q8N6D5 301 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 CLDN22Q8N7P3 220 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 TMEM229BQ8NBD8 167 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 ATP6V1C2Q8NEY4 427 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 C2orf50Q96LR7 162 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 CIB3Q96Q77 187 aaPredicted RBP-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 EFCAB11Q9BUY7 163 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 NSD3Q9BZ95 1437 aa-2.77□□□□□ -2.85
RNU6-340P-201ENST00000364005 FMN2Q9NZ56 1722 aa-2.78□□□□□ -2.85
RNU6-340P-201ENST00000364005 A0A087WVE0 104 aa-2.78□□□□□ -2.85
RNU6-340P-201ENST00000364005 DEFB4AO15263 64 aa-2.78□□□□□ -2.85
RNU6-340P-201ENST00000364005 CRYZL1O95825 349 aa-2.78□□□□□ -2.85
RNU6-340P-201ENST00000364005 UCHL3P15374 230 aa-2.78□□□□□ -2.85
RNU6-340P-201ENST00000364005 C4orf33Q8N1A6 199 aa-2.78□□□□□ -2.85
RNU6-340P-201ENST00000364005 CEP164Q9UPV0 1460 aa-2.78□□□□□ -2.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms