RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 GAGE2EQ4V326 116 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 TMEM155Q4W5P6 130 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 PPDPFLQ8WWR9 84 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 TTTY13Q9BZ97 58 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 GAGE2DQ9UEU5 116 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 VPREB3Q9UKI3 123 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 TRBV25-1A0A075B6N4 114 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 A0A0G2JNJ9 132 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 TEX22C9J3V5 150 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 THBDP07204 575 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 Q6ZS92 163 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 ORMDL3Q8N138 153 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 TMEM75Q8N9X5 138 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 RNASE6Q93091 150 aaKnown RBP6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 Q9UFV3 132 aa6.47□□□□□ -1.37
CDC42SE1-201ENST00000357235 ASH1LQ9NR48 2969 aaKnown RBP6.46□□□□□ -1.37
CDC42SE1-201ENST00000357235 ORM1P02763 201 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 PSMG4Q5JS54 123 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 SIGLEC15Q6ZMC9 328 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 MAP1LC3AQ9H492 121 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 TMEM262E9PQX1 116 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 BUB1B-PAK6H3BSN5 160 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 RHODO00212 210 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 PRRG2O14669 202 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 TIMM23O14925 209 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 EVI2AP22794 236 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 CFAP126Q5VTH2 177 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 LINC00311Q8N616 119 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 NUP37Q8NFH4 326 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 IFI27L1Q96BM0 104 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 PPDPFQ9H3Y8 114 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 SPANXA1Q9NS26 97 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 DKK2Q9UBU2 259 aa6.46□□□□□ -1.38
CDC42SE1-201ENST00000357235 A0A096LNJ9 63 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 I3L2K1 104 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 LY6HO94772 140 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 PRSS1P07477 247 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 SRD5A1P18405 259 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 FCER1GP30273 86 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 SRSF1Q07955 248 aaKnown RBP eCLIP6.45□□□□□ -1.382e-6■■□□□ 11.8
CDC42SE1-201ENST00000357235 IGF2-ASQ6U949 168 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 SHANK2-AS3Q9BTD1 123 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGKV2D-26A0A0A0MRZ7 120 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 TMEM8BA6NDV4 472 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 NCBP2LA6PVI3 153 aaKnown RBP6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 SH2D1AO60880 128 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 NPYP01303 97 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 MRPL51Q4U2R6 128 aaKnown RBP6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 ZNF491Q8N8L2 437 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 MSRB1Q9NZV6 116 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 AKAP13Q12802 2813 aa6.45□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGHV3OR16-13A0A075B7E8 117 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGHV3-74A0A0B4J1X5 117 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 CENPVL3A0A0U1RRI6 287 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 HBDP02042 147 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 IFITM1P13164 125 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 HLA-DMBP28068 263 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 SMCPP49901 116 aaPredicted RBP6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 DLX4Q92988 240 aaPredicted RBP6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 KIR2DL4Q99706 377 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 SPTBN4Q9H254 2564 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 K7EIM0 57 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 SNCGO76070 127 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 ZNF688P0C7X2 276 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 DLX6P56179 175 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 C5orf47Q569G3 176 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 FAM104BQ5XKR9 115 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 FAM57AQ8TBR7 257 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 PIFOQ8TCI5 191 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 PTH2Q96A98 100 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 TMEM14CQ9P0S9 112 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 GAS8-AS1O95177 125 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 TEN1Q86WV5 123 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 HIST1H4GQ99525 98 aa6.44□□□□□ -1.38
CDC42SE1-201ENST00000357235 TLN1Q9Y490 2541 aaKnown RBP6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGHV3-66A0A0C4DH42 116 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 E7EQL1 145 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 H3BRN7 92 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 EGR2P11161 476 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 TAL2Q16559 108 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 C3orf36Q3SXR2 165 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 MEIG1Q5JSS6 88 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 FAM159AQ6UWV7 190 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 GFRALQ6UXV0 394 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 CARD19Q96LW7 228 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGLV1-47P01700 117 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 GATA1P15976 413 aaPredicted RBP6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 ANKHD1Q8IWZ3 2542 aaKnown RBP6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 ZNF292O60281 2723 aa6.43□□□□□ -1.38
CDC42SE1-201ENST00000357235 OVOL3O00110 214 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 NDUFS7O75251 213 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 CRYGBP07316 175 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 LEPP41159 167 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 PSMB2P49721 201 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 IGHV3-49A0A0A0MS15 119 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 ZNF80P51504 273 aaPredicted RBP6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 GTSCR1Q86UQ5 136 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 LOC107984156A0A0G2JMH3 177 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 ERCC8Q13216 396 aa6.42□□□□□ -1.38
CDC42SE1-201ENST00000357235 ARL17AQ8IVW1 177 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms