RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 NEGR1Q7Z3B1 354 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 CEND1Q8N111 149 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 GAGE12HA6NDE8 117 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 CRPP02741 224 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 HLA-DRB4P13762 266 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 AMTNQ6UX39 209 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 HLA-DRB4X5D2U9 266 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 LINC00173Q6ZV60 143 aa12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 TRPT1Q86TN4 253 aaKnown RBP12.38□□□□□ -0.43
TRAPPC11-202ENST00000357207 K7ERJ3 54 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 PCP2Q8IVA1 136 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 KAAG1Q9UBP8 84 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 SDHAF1A6NFY7 115 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 GHRHP01286 108 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 UBE2E1P51965 193 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 MORN5Q5VZ52 161 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 TMEM141Q96I45 108 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 BPESC1Q9GZL8 116 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 KLF12Q9Y4X4 402 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 PAX4O43316 350 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 KMT2EQ8IZD2 1858 aa12.37□□□□□ -0.43
TRAPPC11-202ENST00000357207 SLC25A20O43772 301 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 PATE2Q6UY27 113 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 PRIMA1Q86XR5 153 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 PIP4P2Q8N4L2 257 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 MALP21145 153 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 FAM215AQ9Y5M1 114 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 GATD1Q8NB37 220 aa12.36□□□□□ -0.43
TRAPPC11-202ENST00000357207 PCNX3Q9H6A9 2034 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 TRGV1A0A0A0MS02 117 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 FRMD6-AS1P0C7T7 363 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 EGR2P11161 476 aaPredicted RBP12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 IGFL3Q6UXB1 125 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 OR11H6Q8NGC7 330 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 RNASE8Q8TDE3 154 aaKnown RBP12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 IGLV2-14P01704 120 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 ANXA2RQ3ZCQ2 193 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 FAM167A-AS1Q96KT0 104 aa12.35□□□□□ -0.43
TRAPPC11-202ENST00000357207 TRAV13-1A0A0B4J241 112 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 LGALS1P09382 135 aaKnown RBP12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 ANKRD39Q53RE8 183 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 LINC01545Q5VT33 79 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 IGF2BP2-AS1Q96M15 143 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 B4DSR2 109 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 LY6DQ14210 128 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 C11orf44Q8N8P7 122 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 C8orf31Q8N9H6 132 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 PRO1854Q9UHT4 67 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 HTN3P15516 51 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 PHLDA1Q8WV24 401 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 NUP210Q8TEM1 1887 aaPredicted RBP12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 A0A087WX48 190 aa12.34□□□□□ -0.43
TRAPPC11-202ENST00000357207 GP9P14770 177 aa12.33□□□□□ -0.44
TRAPPC11-202ENST00000357207 AZU1P20160 251 aa12.33□□□□□ -0.44
TRAPPC11-202ENST00000357207 LHBP01229 141 aa12.33□□□□□ -0.44
TRAPPC11-202ENST00000357207 HLA-DMBP28068 263 aa12.33□□□□□ -0.44
TRAPPC11-202ENST00000357207 FGF6P10767 208 aa12.32□□□□□ -0.44
TRAPPC11-202ENST00000357207 ZNF625Q96I27 306 aaPredicted RBP12.32□□□□□ -0.44
TRAPPC11-202ENST00000357207 C20orf78Q9BR46 151 aa12.32□□□□□ -0.44
TRAPPC11-202ENST00000357207 IGKV1OR2-108A0A075B7D4 117 aa12.32□□□□□ -0.44
TRAPPC11-202ENST00000357207 IGKV1-17P01599 117 aa12.32□□□□□ -0.44
TRAPPC11-202ENST00000357207 KNCNA6PVL3 124 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 IGHV3-53P01767 116 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 CTSZQ9UBR2 303 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 TRBV25-1A0A075B6N4 114 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 H3BMM0 161 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 SYNJ2BPP57105 145 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 TCF15Q12870 199 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 UBE2WQ96B02 151 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 AGPAT4-IT1Q9H0P7 198 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 C22orf46C9J442 243 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 LEPROTO15243 131 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 SPINK13Q1W4C9 94 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 ODF3L1Q8IXM7 274 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 DYNAPQ8N1N2 210 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 MED12LQ86YW9 2145 aa12.31□□□□□ -0.44
TRAPPC11-202ENST00000357207 PRR30Q53SZ7 412 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 SPRNQ5BIV9 151 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 DEFB131AP59861 70 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 C6orf226Q5I0X4 101 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 S100A7L2Q5SY68 101 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 ATP6V0BQ99437 205 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 SCRT2Q9NQ03 307 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 SPANXA1Q9NS26 97 aa12.3□□□□□ -0.44
TRAPPC11-202ENST00000357207 I3L3M4 83 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 J3QQQ9 107 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 HIST1H4AP62805 103 aaKnown RBP12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 GTSF1Q8WW33 167 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 PRSS29PA6NIE9 313 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 RHODO00212 210 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 NDUFA4O00483 81 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 JPT2Q9H910 190 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 TEX48A0A1B0GUV7 120 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 INSP01308 110 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 GATA1P15976 413 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 DSCR9P59020 149 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 UBE2E2Q96LR5 201 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 CSPG4Q6UVK1 2322 aa12.29□□□□□ -0.44
TRAPPC11-202ENST00000357207 RUSC1-AS1Q66K80 236 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 89.1 ms