RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 NOP10Q9NPE3 64 aaKnown RBP4.42□□□□□ -1.7
PTPRD-202ENST00000356435 KIR3DS1Q14943 382 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 LINC00311Q8N616 119 aa4.42□□□□□ -1.7
PTPRD-202ENST00000356435 IGLV3-1P01715 115 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 ATP5G1P05496 136 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 CLPSL2Q6UWE3 100 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 Q6ZWC4 215 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 Q9HAA7 133 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 NACAE9PAV3 2078 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 CCL24O00175 119 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 MRPL23Q16540 153 aaKnown RBP4.41□□□□□ -1.7
PTPRD-202ENST00000356435 ZNF106Q9H2Y7 1883 aaKnown RBP4.41□□□□□ -1.7
PTPRD-202ENST00000356435 COL4A3Q01955 1670 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 C9JAW5 83 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 LOXP28300 417 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-202ENST00000356435 Q8NFD4 153 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 TCF15Q12870 199 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 MRPL53Q96EL3 112 aaKnown RBP4.41□□□□□ -1.7
PTPRD-202ENST00000356435 TRPM7Q96QT4 1865 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 FUSP35637 526 aaKnown RBP eCLIP4.41□□□□□ -1.7
PTPRD-202ENST00000356435 UBE2AP49459 152 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 HAMPP81172 84 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 Q6ZQT7 251 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 SPART-AS1P0CW21 52 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 EGR2P11161 476 aaPredicted RBP4.41□□□□□ -1.7
PTPRD-202ENST00000356435 PIFOQ8TCI5 191 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 NDUFB1O75438 58 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 CRYGCP07315 174 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 SPINK8P0C7L1 97 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 XCL1P47992 114 aa4.41□□□□□ -1.7
PTPRD-202ENST00000356435 K7EQD1 137 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 FAM104BQ5XKR9 115 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 hDV102S1A0JD36 115 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 C5orf24Q7Z6I8 188 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 PRSS33Q8NF86 280 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 CAMK2N2Q96S95 79 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 TMEM213A2RRL7 107 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 PLXNA4Q9HCM2 1894 aa4.4□□□□□ -1.7
PTPRD-202ENST00000356435 PLA2G2CQ5R387 149 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 FAM120AOSQ5T036 256 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 MGAMO43451 1857 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 CDPF1Q6NVV7 123 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 SLC25A29Q8N8R3 303 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 CFHR4Q92496 578 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 DEFB112Q30KQ8 113 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 BVES-AS1Q5T3Y7 98 aa4.4□□□□□ -1.71
PTPRD-202ENST00000356435 TRBV20-1A0A075B6N2 111 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 TRAV26-2A0A0B4J265 109 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 C8orf31Q8N9H6 132 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 PLXNA2O75051 1894 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 NAA38Q9BRA0 125 aaKnown RBP4.39□□□□□ -1.71
PTPRD-202ENST00000356435 MDC1Q14676 2089 aaKnown RBP4.39□□□□□ -1.71
PTPRD-202ENST00000356435 A0A087X0K7 114 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 IGHV4-59P01825 116 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 ORMDL1Q9P0S3 153 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 IGLC2P0DOY2 106 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 IGLC3P0DOY3 106 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 H3BQ85 93 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 GYPEP15421 78 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 HEATR1Q9H583 2144 aaKnown RBP4.39□□□□□ -1.71
PTPRD-202ENST00000356435 C14orf177Q52M58 125 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 C9orf153Q5TBE3 101 aa4.39□□□□□ -1.71
PTPRD-202ENST00000356435 RBAKDNA6NC62 111 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 C3orf79P0CE67 100 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 PRR25Q96S07 402 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 NPSP0C0P6 89 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 C11orf52Q96A22 123 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 CARD19Q96LW7 228 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 FANCD2OSQ96PS1 177 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 IGHV3-30P01768 117 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 IGHV3-30-3P0DP02 117 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 IGHV3-30-5P0DP03 117 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 C16orf54Q6UWD8 224 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 RNF138Q8WVD3 245 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 DEFB105AQ8NG35 78 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 FAM215AQ9Y5M1 114 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 CACNA1EQ15878 2313 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 CLPSL1A2RUU4 121 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 SHISA9B4DS77 424 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 IGLV2-23P01705 113 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 C17orf58Q2M2W7 97 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 C15orf53Q8NAA6 179 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 COX11Q9Y6N1 276 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 HERV-K104P63124 156 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 U3KQE9 123 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 NCKAP5O14513 1909 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 BUB3O43684 328 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 SMAD5-AS1Q9Y6J3 95 aa4.38□□□□□ -1.71
PTPRD-202ENST00000356435 SIGLEC8Q9NYZ4 499 aa4.37□□□□□ -1.71
PTPRD-202ENST00000356435 KAAG1Q9UBP8 84 aa4.37□□□□□ -1.71
PTPRD-202ENST00000356435 NDUFA1O15239 70 aa4.37□□□□□ -1.71
PTPRD-202ENST00000356435 RBX1P62877 108 aa4.37□□□□□ -1.71
PTPRD-202ENST00000356435 MRPL51Q4U2R6 128 aaKnown RBP4.37□□□□□ -1.71
PTPRD-202ENST00000356435 ZNF493Q6ZR52 646 aa4.37□□□□□ -1.71
PTPRD-202ENST00000356435 C9orf47Q6ZRZ4 202 aa4.37□□□□□ -1.71
PTPRD-202ENST00000356435 PIP4P1Q86T03 277 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.2 ms