RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 IGLC3P0DOY3 106 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 DAZ2Q13117 558 aaKnown RBP5.11□□□□□ -1.59
UPF2-201ENST00000356352 PLA2G2CQ5R387 149 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 DAZ4Q86SG3 579 aaKnown RBP5.11□□□□□ -1.59
UPF2-201ENST00000356352 CYYR1Q96J86 154 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 DAZ3Q9NR90 486 aaKnown RBP5.11□□□□□ -1.59
UPF2-201ENST00000356352 U3KQE9 123 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 K7EQD1 137 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 WDR86Q86TI4 376 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 MAPK1IP1LQ8NDC0 245 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 MRAPQ8TCY5 172 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 ZNF503Q96F45 646 aa5.11□□□□□ -1.59
UPF2-201ENST00000356352 H0YGX0 51 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 CHKB-CPT1BH3BT56 60 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 FAM120AOSQ5T036 256 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 Q6ZVH6 145 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 IGHV2-70P01814 119 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 ATP5G1P05496 136 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 SPART-AS1P0CW21 52 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 XCL1P47992 114 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 RPL18AQ02543 176 aaKnown RBP5.1□□□□□ -1.59
UPF2-201ENST00000356352 ZNF491Q8N8L2 437 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 BUB3O43684 328 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 Q6ZWC4 215 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 ANK1P16157 1881 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 C9JQL5 133 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 ZNF726P1Q15940 193 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 MYOFQ9NZM1 2061 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 NDUFS7O75251 213 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 CFC1BP0CG36 223 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 CFC1P0CG37 223 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 DEFB113Q30KQ7 82 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 NPBQ8NG41 125 aa5.1□□□□□ -1.59
UPF2-201ENST00000356352 KLF2Q9Y5W3 355 aaPredicted RBP5.1□□□□□ -1.59
UPF2-201ENST00000356352 SCN2AQ99250 2005 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 ZSWIM8A7E2V4 1837 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 A0A096LPF7 62 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 DEFB112Q30KQ8 113 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 CAMK2N2Q96S95 79 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 TM2D2Q9BX73 214 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 PROK2Q9HC23 129 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 TPSG1Q9NRR2 321 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 GREB1Q4ZG55 1949 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 THADAQ6YHU6 1953 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 K7EP13 123 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 Q9H8V8 135 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 CXCL5P42830 114 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 MP68P56378 58 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 PRR20EP86478 221 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 PRR20CP86479 221 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 PRR20DP86480 221 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 PRR20BP86481 221 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 PRR20AP86496 221 aa5.09□□□□□ -1.59
UPF2-201ENST00000356352 LY6G6EA0A0G2JKS1 128 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 TINCRA0A1B0GVN0 87 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 COX7A2LO14548 114 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 BAALC-AS2P0C853 105 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 C10orf91Q5T1B1 145 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 CLPSL2Q6UWE3 100 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 U3KQA8 63 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 RALGAPA1Q6GYQ0 2036 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 DOCK6Q96HP0 2047 aa5.09□□□□□ -1.6
UPF2-201ENST00000356352 TRAV12-1A0A0B4J245 112 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 A0A0J9YY99 117 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 F6UB75 175 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 GP9P14770 177 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 DUX4L9Q6RFH8 374 aaPredicted RBP5.08□□□□□ -1.6
UPF2-201ENST00000356352 C15orf53Q8NAA6 179 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 ATP6V0E2Q8NHE4 81 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 FAM215AQ9Y5M1 114 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 TMEM89A2RUT3 159 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 C12orf74Q32Q52 190 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 IGFBPL1Q8WX77 278 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 C1orf147Q96MC9 270 aaPredicted RBP5.08□□□□□ -1.6
UPF2-201ENST00000356352 PLXNA3P51805 1871 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 IGHG2P01859 326 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 IGLL1P15814 213 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 DYNAPQ8N1N2 210 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 KLK5Q9Y337 293 aaPredicted RBP5.08□□□□□ -1.6
UPF2-201ENST00000356352 Q6ZQT7 251 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 PRSS33Q8NF86 280 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 DEFB105AQ8NG35 78 aa5.08□□□□□ -1.6
UPF2-201ENST00000356352 TRAV4A0A0B4J268 109 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 IGF2-ASQ6U949 168 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 IL17DQ8TAD2 202 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 PIFOQ8TCI5 191 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 SBF1O95248 1867 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.07□□□□□ -1.6
UPF2-201ENST00000356352 CENPVL3A0A0U1RRI6 287 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 IGLC7A0M8Q6 106 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 IGKV2-29A2NJV5 120 aaPredicted RBP5.07□□□□□ -1.6
UPF2-201ENST00000356352 IGLV3-1P01715 115 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 IGHV4-59P01825 116 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 CRYBA4P53673 196 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 RBM3P98179 157 aaKnown RBP5.07□□□□□ -1.6
UPF2-201ENST00000356352 PIP4P1Q86T03 277 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 AGPAT4-IT1Q9H0P7 198 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 GAGE12HA6NDE8 117 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 GYPEP15421 78 aa5.07□□□□□ -1.6
UPF2-201ENST00000356352 ETDBQ3ZM63 59 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms