RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 DLEU1O43261 78 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 ADAMTSL5Q6ZMM2 481 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 VOPP1Q96AW1 172 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 C17orf77Q96MU5 243 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 CTSZQ9UBR2 303 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 KLF5Q13887 457 aaPredicted RBP10.45□□□□□ -0.74
SCN8A-202ENST00000355133 NOP10Q9NPE3 64 aaKnown RBP10.45□□□□□ -0.74
SCN8A-202ENST00000355133 SUMO4Q6EEV6 95 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 FXYD5Q96DB9 178 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 VPREB3Q9UKI3 123 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 CD5LO43866 347 aa10.45□□□□□ -0.74
SCN8A-202ENST00000355133 POLR3KQ9Y2Y1 108 aaPredicted RBP10.45□□□□□ -0.74
SCN8A-202ENST00000355133 ZNF407Q9C0G0 2248 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 SPRNQ5BIV9 151 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 ZMAT4Q9H898 229 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 KAAG1Q9UBP8 84 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 NBASA2RRP1 2371 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 IGHV2-70P01814 119 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 GTSF1LQ9H1H1 148 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 TSSC4Q9Y5U2 329 aaPredicted RBP10.44□□□□□ -0.74
SCN8A-202ENST00000355133 TRAV25A0A0B4J276 109 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 NPYP01303 97 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 SPINK8P0C7L1 97 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 HOXD3P31249 432 aaPredicted RBP10.44□□□□□ -0.74
SCN8A-202ENST00000355133 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
SCN8A-202ENST00000355133 SMIM27A0A1W2PRY6 76 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 SIGLEC8Q9NYZ4 499 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 IGHV1-24A0A0C4DH33 117 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 EREGO14944 169 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 GNRH2O43555 120 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 ZNF491Q8N8L2 437 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 IGLV2-23P01705 113 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 SCRT2Q9NQ03 307 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 CCL24O00175 119 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 RMI2Q96E14 147 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 ATP6V0BQ99437 205 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 A8MWP6 167 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 UBE2V1Q13404 147 aa10.43□□□□□ -0.74
SCN8A-202ENST00000355133 WDR81Q562E7 1941 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 SOCS3O14543 225 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 MORN5Q5VZ52 161 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 SLX1AQ9BQ83 275 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 IGKV1OR2-108A0A075B7D4 117 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 DYNAPQ8N1N2 210 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 MRPL53Q96EL3 112 aaKnown RBP10.42□□□□□ -0.74
SCN8A-202ENST00000355133 IGHV4-61A0A0C4DH41 118 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 FAM231DQ6ZW35 169 aa10.42□□□□□ -0.74
SCN8A-202ENST00000355133 WNK2Q9Y3S1 2297 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 FOXI2Q6ZQN5 318 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 SMIM2Q9BVW6 85 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 MRPL35Q9NZE8 188 aaKnown RBP10.41□□□□□ -0.74
SCN8A-202ENST00000355133 KIAA1671Q9BY89 1806 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 RLFQ13129 1914 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 IGKV2D-24A0A075B6R9 120 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 IGHV4-38-2P0DP08 117 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 RBMY1FQ15415 496 aaKnown RBP10.41□□□□□ -0.74
SCN8A-202ENST00000355133 APRG1Q8IVJ8 170 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 U3KQE9 123 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 SPRY2O43597 315 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 DEFB113Q30KQ7 82 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 Q6ZQT7 251 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 SPTAN1Q13813 2472 aaKnown RBP10.41□□□□□ -0.74
SCN8A-202ENST00000355133 IGHV4-30-2A0A087WSY4 118 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 H3BUA1 57 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 SLURP1P55000 103 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 FOXE3Q13461 319 aa10.41□□□□□ -0.74
SCN8A-202ENST00000355133 H3BMM0 161 aa10.4□□□□□ -0.74
SCN8A-202ENST00000355133 C11orf53Q8IXP5 236 aa10.4□□□□□ -0.74
SCN8A-202ENST00000355133 UBE2WQ96B02 151 aa10.4□□□□□ -0.74
SCN8A-202ENST00000355133 XCL1P47992 114 aa10.4□□□□□ -0.74
SCN8A-202ENST00000355133 IGLC7A0M8Q6 106 aa10.4□□□□□ -0.75
SCN8A-202ENST00000355133 WIPF3A6NGB9 483 aa10.4□□□□□ -0.75
SCN8A-202ENST00000355133 ZNF124Q15973 351 aa10.4□□□□□ -0.75
SCN8A-202ENST00000355133 CFHR4Q92496 578 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 NRGNQ92686 78 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 CRLF1O75462 422 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 Q9HAA7 133 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 IGLV3-1P01715 115 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 LHBP01229 141 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 RHOHQ15669 191 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 TAL2Q16559 108 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 COX11Q9Y6N1 276 aa10.39□□□□□ -0.75
SCN8A-202ENST00000355133 CENPVL3A0A0U1RRI6 287 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 HERVK_113P63121 156 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 AGPAT4-IT1Q9H0P7 198 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 MGAMO43451 1857 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.38□□□□□ -0.75
SCN8A-202ENST00000355133 IGKV2-29A2NJV5 120 aaPredicted RBP10.38□□□□□ -0.75
SCN8A-202ENST00000355133 FGF6P10767 208 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 Q6ZWC4 215 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 LTAP01374 205 aa10.38□□□□□ -0.75
SCN8A-202ENST00000355133 HAMPP81172 84 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PRR20EP86478 221 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PRR20CP86479 221 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PRR20DP86480 221 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PRR20BP86481 221 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PRR20AP86496 221 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 PLXNA4Q9HCM2 1894 aa10.37□□□□□ -0.75
SCN8A-202ENST00000355133 HELZP42694 1942 aaKnown RBP10.37□□□□□ -0.75
SCN8A-202ENST00000355133 EGR2P11161 476 aaPredicted RBP10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms