RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 C6orf201Q7Z4U5 140 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 C11orf45Q8TAV5 145 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 BORCS7Q96B45 105 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 AP1S3Q96PC3 154 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 KRTAP4-5Q9BYR2 181 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 RCL1Q9Y2P8 373 aaKnown RBP8.29□□□□□ -1.08
RTN3-204ENST00000354497 DNAH17Q9UFH2 4485 aa8.29□□□□□ -1.08
RTN3-204ENST00000354497 TRAV25A0A0B4J276 109 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 A0A1B0GVY2 172 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 C7orf71A4D174 169 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 CEBPZOSA8MTT3 80 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 IGLL5B9A064 214 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 F8W1H4 67 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 PROP1O75360 226 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 CRYGBP07316 175 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 FCGR2BP31994 310 aaPredicted RBP8.28□□□□□ -1.08
RTN3-204ENST00000354497 AMTP48728 403 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 TCL1AP56279 114 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 C15orf32Q32M92 178 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 FAM78BQ5VT40 261 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 RASL11AQ6T310 242 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 OR10G9Q8NGN4 311 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 SRSF12Q8WXF0 261 aaKnown RBP8.28□□□□□ -1.08
RTN3-204ENST00000354497 CHRDL1Q9BU40 450 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 NAA60Q9H7X0 242 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 CYSLTR1Q9Y271 337 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 S4R3C0 116 aa8.28□□□□□ -1.08
RTN3-204ENST00000354497 PKHD1P08F94 4074 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 A0A1W2PS18 150 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 PRSS29PA6NIE9 313 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 LGALS9O00182 355 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 SIVA1O15304 175 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 SLC25A6P12236 298 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 POU2AF1Q16633 256 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 FAM106AQ4KMX7 169 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 TMEM177Q53S58 311 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 Q6ZS49 121 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 ERASQ7Z444 233 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 MRPL18Q9H0U6 180 aaKnown RBP8.27□□□□□ -1.09
RTN3-204ENST00000354497 SPANXCQ9NY87 97 aa8.27□□□□□ -1.09
RTN3-204ENST00000354497 MUC21A0A0G2JKD1 596 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 MUC21A0A140T8X8 626 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 FAM231BA6NCW3 169 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 ACTL6BO94805 426 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 VMA21Q3ZAQ7 101 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 MUC21Q5SSG8 566 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 CLEC19AQ6UXS0 136 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 LSM10Q969L4 123 aaKnown RBP8.26□□□□□ -1.09
RTN3-204ENST00000354497 HINT2Q9BX68 163 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 QTRT1Q9BXR0 403 aaKnown RBP8.26□□□□□ -1.09
RTN3-204ENST00000354497 OR2D2Q9H210 308 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 RPRMQ9NS64 109 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 IL36BQ9NZH7 164 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
RTN3-204ENST00000354497 TRAV34A0A0B4J273 112 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 ZFP92A6NM28 416 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 SRRM4A7MD48 611 aaKnown RBP8.25□□□□□ -1.09
RTN3-204ENST00000354497 TMEM50AO95807 157 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 ID3Q02535 119 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 UNC119Q13432 240 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 RTL8BQ17RB0 113 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 PSMG4Q5JS54 123 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 LCN15Q6UWW0 184 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 GPHB5Q86YW7 130 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 ATP6V0E2Q8NHE4 81 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 KIR2DL5BQ8NHK3 375 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 BLNKQ8WV28 456 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 C5orf30Q96GV9 206 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 HDHD3Q9BSH5 251 aaPredicted RBP8.25□□□□□ -1.09
RTN3-204ENST00000354497 NAT8BQ9UHF3 227 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 HSPB8Q9UJY1 196 aa8.25□□□□□ -1.09
RTN3-204ENST00000354497 FOXI3A8MTJ6 420 aaPredicted RBP8.24□□□□□ -1.09
RTN3-204ENST00000354497 DEFB4AO15263 64 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 NAPSAO96009 420 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 HLA-DQA1P01909 254 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 SCTP09683 121 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 NKX2-1P43699 371 aaPredicted RBP8.24□□□□□ -1.09
RTN3-204ENST00000354497 TCTAP57738 103 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 MRGPRG-AS1Q2M3A8 158 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 GCSAMLQ5JQS6 135 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 C10orf55Q5SWW7 151 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 OR5C1Q8NGR4 320 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 OR10AG1Q8NH19 301 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 APLNQ9ULZ1 77 aa8.24□□□□□ -1.09
RTN3-204ENST00000354497 TEX48A0A1B0GUV7 120 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 A0A1B0GV50 99 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 A0A1W2PPM0 123 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 GPR183P32249 361 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 UBE2G1P62253 170 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 ZNF726P1Q15940 193 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 TEX45Q8NA69 505 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 OR4A5Q8NH83 315 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 PTH2Q96A98 100 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 EEF1AKMT3Q96AZ1 226 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 TPPP3Q9BW30 176 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 TMEM59Q9BXS4 323 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 KCNK15Q9H427 330 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 MAP6D1Q9H9H5 199 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 SCRT2Q9NQ03 307 aa8.23□□□□□ -1.09
RTN3-204ENST00000354497 THYN1Q9P016 225 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms