RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 ARFGEF3Q5TH69 2177 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 HIVEP3Q5T1R4 2406 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 CELSR2Q9HCU4 2923 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 IGHV4-61A0A0C4DH41 118 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 DLEU1O43261 78 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 LOXL1Q08397 574 aaPredicted RBP2.87□□□□□ -1.95
RNF38-203ENST00000353739 ORMDL2Q53FV1 153 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 SPANXN1Q5VSR9 72 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 GPHB5Q86YW7 130 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 C20orf78Q9BR46 151 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 SIGLEC8Q9NYZ4 499 aa2.87□□□□□ -1.95
RNF38-203ENST00000353739 CRYBG3Q68DQ2 2970 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 YLPM1P49750 1951 aaKnown RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 ABCA4P78363 2273 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 H3BUX3 64 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 LGALS9O00182 355 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 KIR3DS1Q14943 382 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 PIFOQ8TCI5 191 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 MYOZ3Q8TDC0 251 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 ZNF747Q9BV97 191 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 SCRT2Q9NQ03 307 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 ANKHD1Q8IWZ3 2542 aaKnown RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 TRAV2A0A0B4J234 112 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 TRAV8-2A0A0B4J237 113 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 A0A1W2PPR1 153 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 A6NDN8 102 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 ELANEP08246 267 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 SNRPD3P62318 126 aaKnown RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 CFHR3Q02985 330 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 SRSF1Q07955 248 aaKnown RBP eCLIP2.86□□□□□ -1.95
RNF38-203ENST00000353739 AMN1Q8IY45 258 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 TMEM86BQ8N661 226 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 PKDREJQ9NTG1 2253 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 TMSB15BA0A087X1C1 80 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 G3V318 75 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 NDUFS7O75251 213 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 CSN3P07498 182 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 SMIM17P0DL12 118 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 PPIFP30405 207 aaKnown RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 SEC11AP67812 179 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 LAGE3Q14657 143 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 APRG1Q8IVJ8 170 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 URB1-AS1Q96HZ7 61 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 AP1S3Q96PC3 154 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 DPH3P1Q9H4G8 78 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 TNFRSF6BO95407 300 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 COX8AP10176 69 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 IFI27P40305 119 aaPredicted RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 RPL32P62910 135 aaKnown RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 ERCC8Q13216 396 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 BATFQ16520 125 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 BCL6BQ8N143 479 aaPredicted RBP2.86□□□□□ -1.95
RNF38-203ENST00000353739 OR2K2Q8NGT1 345 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 AGPAT4-IT1Q9H0P7 198 aa2.86□□□□□ -1.95
RNF38-203ENST00000353739 FLNCQ14315 2725 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 TMEM213A2RRL7 107 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 IGHG4P01861 327 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 S100A4P26447 101 aaKnown RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 PCP4P48539 62 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 TMEM219Q86XT9 240 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 Q8TAT8 98 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 IFI27L1Q96BM0 104 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 PEMTQ9UBM1 199 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 TPRP12270 2363 aaKnown RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 IGHV4-30-2A0A087WSY4 118 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 SOCS3O14543 225 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 PLNP26678 52 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 LY6EQ16553 131 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 PRSS57Q6UWY2 283 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 OR8A1Q8NGG7 326 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 FAM19A4Q96LR4 140 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 VPREB3Q9UKI3 123 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 SPTBN1Q01082 2364 aaKnown RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 TRGV11A0A075B6L2 103 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 TRAV12-1A0A0B4J245 112 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 LOC389332A0A1B0GUA5 103 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 LGALS1P09382 135 aaKnown RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 IGHV4-38-2P0DP08 117 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 IGLL1P15814 213 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 ZNF25P17030 456 aaPredicted RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 HSD52Q0P140 79 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 FBLN7Q53RD9 439 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 PAPPA-AS1Q5QFB9 102 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 RNF185Q96GF1 192 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 PHLDA3Q9Y5J5 127 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 PKD1L2Q7Z442 2459 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 C7orf71A4D174 169 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 ZNF80P51504 273 aaPredicted RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 RPL11P62913 178 aaKnown RBP2.85□□□□□ -1.95
RNF38-203ENST00000353739 RNF182Q8N6D2 247 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 RNF152Q8N8N0 203 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 WFDC12Q8WWY7 111 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 RHPN1-AS1Q9BWJ2 59 aa2.85□□□□□ -1.95
RNF38-203ENST00000353739 DOCK11Q5JSL3 2073 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 IGSF10Q6WRI0 2623 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 DPM2O94777 84 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 NXPH4O95158 308 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 NPYP01303 97 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 IGKCP01834 107 aa2.84□□□□□ -1.95
RNF38-203ENST00000353739 OXLD1Q5BKU9 147 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms