RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 BUB1B-PAK6H3BSN5 160 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 PTPRZ1P23471 2315 aaPredicted RBP8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 C22orf34Q6ZV56 151 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 OR11H6Q8NGC7 330 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 CCL17Q92583 94 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 RNASE6Q93091 150 aaKnown RBP8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 SPTBN4Q9H254 2564 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 CACNA1HO95180 2353 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 TRBV7-9A0A0J9YWB2 115 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 B5MCH6 92 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 M0QXV9 152 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 RHODO00212 210 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 NDUFA3O95167 84 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 ZNF80P51504 273 aaPredicted RBP8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 PTH2Q96A98 100 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 RNF125Q96EQ8 232 aa8.01□□□□□ -1.13
CHRNA1-202ENST00000348749 A8MWV9 139 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 APELAP0DMC3 54 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 PRB4P10163 310 aaPredicted RBP8□□□□□ -1.13
CHRNA1-202ENST00000348749 GATA1P15976 413 aaPredicted RBP8□□□□□ -1.13
CHRNA1-202ENST00000348749 BSPH1Q075Z2 132 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 TMEM78Q5T7P6 136 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 ZFP2Q6ZN57 461 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 DTX2Q86UW9 622 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 VPS13AQ96RL7 3174 aa8□□□□□ -1.13
CHRNA1-202ENST00000348749 IGKV2-40A0A087WW87 121 aaPredicted RBP7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 LOC107984156A0A0G2JMH3 177 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 K7EIM0 57 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 IGKV2D-40P01614 121 aaPredicted RBP7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 ZNF672Q499Z4 452 aaPredicted RBP7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 IL17RELQ6ZVW7 336 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 ARL17AQ8IVW1 177 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 SPANXA1Q9NS26 97 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 ICE1Q9Y2F5 2266 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 IGHV3-72A0A0B4J1Y9 119 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 FAM90A27PA6NNH2 459 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 CD7P09564 240 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 ASIPP42127 132 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 Q6Q795 121 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 NRACQ8N912 160 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 RAX2Q96IS3 184 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 DYNLRB1Q9NP97 96 aa7.99□□□□□ -1.13
CHRNA1-202ENST00000348749 FABP5P3A8MUU1 101 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 LY6LH3BQJ8 138 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 SCGB2A1O75556 95 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 TCL1BO95988 128 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 CNTFRP26992 372 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 ANKRD29Q8N6D5 301 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 IGFBPL1Q8WX77 278 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 FBXL15Q9H469 300 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 RAXQ9Y2V3 346 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 ARFGEF3Q5TH69 2177 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 MALRD1Q5VYJ5 2156 aa7.98□□□□□ -1.13
CHRNA1-202ENST00000348749 A0A0G2JNJ9 132 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 GAGE12JA6NER3 117 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 LINC01548A6NM66 108 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 GAGE7O76087 117 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 ORM1P02763 201 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 GAGE12FP0CL80 117 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 GAGE12GP0CL81 117 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 GAGE12IP0CL82 117 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 NDUFV3P56181 108 aaKnown RBP7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 GAGE4Q13068 117 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 Q9UFV3 132 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 CACNA1BQ00975 2339 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 SVILO95425 2214 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 PLXNB1O43157 2135 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 B9A039 149 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 IGHG4P01861 327 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 SLC25A16P16260 332 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 EFNA4P52798 201 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 HERV-K104P63124 156 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 NDUFA11Q86Y39 141 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 DEFB124Q8NES8 71 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 NPBQ8NG41 125 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
CHRNA1-202ENST00000348749 ZNF815PA8K554 130 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 CNIH1O95406 144 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 COX6B1P14854 86 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 RPL7P18124 248 aaKnown RBP7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 MFAP4P55083 255 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 RPL32P62910 135 aaKnown RBP7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 GAGE2BQ13066 116 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 GAGE2EQ4V326 116 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 NEXN-AS1Q8NBZ9 246 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 Q8TAT8 98 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 PRADC1Q9BSG0 188 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 GAGE2DQ9UEU5 116 aa7.96□□□□□ -1.14
CHRNA1-202ENST00000348749 RIF1Q5UIP0 2472 aaKnown RBP7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 CENPVL3A0A0U1RRI6 287 aa7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 SRSF9Q13242 221 aaKnown RBP eCLIP7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 TOMM6Q96B49 74 aa7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 KIR2DL4Q99706 377 aa7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 NBR2O15453 112 aa7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 SNCGO76070 127 aa7.95□□□□□ -1.14
CHRNA1-202ENST00000348749 KMT2BQ9UMN6 2715 aaPredicted RBP7.94□□□□□ -1.14
CHRNA1-202ENST00000348749 E7EQL1 145 aa7.94□□□□□ -1.14
CHRNA1-202ENST00000348749 TRGV3P03979 118 aa7.94□□□□□ -1.14
CHRNA1-202ENST00000348749 IFITM1P13164 125 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms