RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 SSX7Q7RTT5 188 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 C18orf15Q96N68 181 aa9.23□□□□□ -0.93
CLCC1-202ENST00000348264 HMGB3O15347 200 aaKnown RBP9.22□□□□□ -0.93
CLCC1-202ENST00000348264 ZNF266Q14584 549 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 SOHLH1Q5JUK2 328 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 HSD17B11Q8NBQ5 300 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 VSIG2Q96IQ7 327 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 HYLS1Q96M11 299 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 ARPC5LQ9BPX5 153 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 MED28Q9H204 178 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 OTORQ9NRC9 128 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 MRPL16Q9NX20 251 aaKnown RBP9.22□□□□□ -0.93
CLCC1-202ENST00000348264 RPH3ALQ9UNE2 315 aa9.22□□□□□ -0.93
CLCC1-202ENST00000348264 A0A1W2PPV4 95 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 H3BNG1 76 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 Q5BKY6 102 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 MUC21Q5SSG8 566 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 PQLC2Q6ZP29 291 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 OR10G4Q8NGN3 311 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 OR10G9Q8NGN4 311 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 OR10G7Q8NGN6 311 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 AQP10Q96PS8 301 aa9.21□□□□□ -0.94
CLCC1-202ENST00000348264 RYR1P21817 5038 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 PGPA6NDG6 321 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 IGHV3-53P01767 116 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 ARL14EPLP0DKL9 152 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 ZNF415Q09FC8 603 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 ESRGQ1W209 222 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 Q6AWC8 147 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 OR2G3Q8NGZ4 309 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 ST6GAL2Q96JF0 529 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 KRTAP1-5Q9BYS1 174 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
CLCC1-202ENST00000348264 A0A096LPF7 62 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 TRAV8-1A0A0A6YYK1 113 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 GIPP09681 153 aaPredicted RBP9.19□□□□□ -0.94
CLCC1-202ENST00000348264 ATP6V0CP27449 155 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 CDC34P49427 236 aaPredicted RBP9.19□□□□□ -0.94
CLCC1-202ENST00000348264 GNG5P63218 68 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 GOLT1AQ6ZVE7 132 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 C6orf223Q8N319 242 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 CMTM2Q8TAZ6 248 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 TMED6Q8WW62 240 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 MDFICQ9P1T7 246 aa9.19□□□□□ -0.94
CLCC1-202ENST00000348264 TNP2Q05952 138 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 TMEM183BQ1AE95 376 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 TMEM183AQ8IXX5 376 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 TVP23CQ96ET8 276 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 PSMG3Q9BT73 122 aaPredicted RBP9.18□□□□□ -0.94
CLCC1-202ENST00000348264 UPK3BQ9BT76 320 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 SH3BGRL3Q9H299 93 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 Q9H8V8 135 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 LRP1BQ9NZR2 4599 aa9.18□□□□□ -0.94
CLCC1-202ENST00000348264 MRPS16Q9Y3D3 137 aaKnown RBP9.18□□□□□ -0.94
CLCC1-202ENST00000348264 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 RNF222A6NCQ9 220 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 F6UZH7 168 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 ZNF575Q86XF7 245 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 RAB24Q969Q5 203 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 NAGKQ9UJ70 344 aa9.17□□□□□ -0.94
CLCC1-202ENST00000348264 FXYD6-FXYD2A0A087WZ82 144 aa9.16□□□□□ -0.94
CLCC1-202ENST00000348264 GCHFRP30047 84 aa9.16□□□□□ -0.94
CLCC1-202ENST00000348264 FAM159AQ6UWV7 190 aa9.16□□□□□ -0.94
CLCC1-202ENST00000348264 ARL6IP6Q8N6S5 226 aa9.16□□□□□ -0.94
CLCC1-202ENST00000348264 ASB13Q8WXK3 278 aa9.16□□□□□ -0.94
CLCC1-202ENST00000348264 SGK494Q96LW2 274 aa9.16□□□□□ -0.94
CLCC1-202ENST00000348264 TRGV11A0A075B6L2 103 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 PAX4O43316 350 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 SFTA3P0C7M3 94 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 FHL2Q14192 279 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 TDRG1Q3Y452 100 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 TTC32Q5I0X7 151 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 RPL7L1Q6DKI1 246 aaKnown RBP9.15□□□□□ -0.94
CLCC1-202ENST00000348264 SUN5Q8TC36 379 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 C8orf49Q96NF6 230 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 TREM1Q9NP99 234 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 PRO0255Q9UI72 69 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 TNFSF18Q9UNG2 199 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 ICOSQ9Y6W8 199 aa9.15□□□□□ -0.94
CLCC1-202ENST00000348264 GGTLC3B5MD39 225 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 G3V3Q6 166 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 MBP02144 154 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 MED14OSP0DP75 135 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 CRYBA4P53673 196 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 SERF2P84101 59 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 C5orf17Q8NAS9 161 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 INO80EQ8NBZ0 244 aaPredicted RBP9.14□□□□□ -0.95
CLCC1-202ENST00000348264 OR2T35Q8NGX2 323 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 RASL10AQ92737 203 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 ZNF479Q96JC4 524 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 SPXQ9BT56 116 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 KRTAP17-1Q9BYP8 105 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 HSPG2P98160 4391 aa9.14□□□□□ -0.95
CLCC1-202ENST00000348264 DNAH5Q8TE73 4624 aa9.13□□□□□ -0.95
CLCC1-202ENST00000348264 TRAV21A0A0B4J279 112 aa9.13□□□□□ -0.95
CLCC1-202ENST00000348264 IGHV3-16A0A0C4DH30 117 aa9.13□□□□□ -0.95
CLCC1-202ENST00000348264 GNRH2O43555 120 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms