RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 CD300EQ496F6 205 aaPredicted RBP13.97□□□□□ -0.17
PTN-201ENST00000348225 ZFP82Q8N141 532 aa13.97□□□□□ -0.17
PTN-201ENST00000348225 SAV1Q9H4B6 383 aaPredicted RBP13.97□□□□□ -0.17
PTN-201ENST00000348225 Q6AWC8 147 aa13.97□□□□□ -0.17
PTN-201ENST00000348225 WDR73Q6P4I2 378 aa13.97□□□□□ -0.17
PTN-201ENST00000348225 A0A0J9YX75 114 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 SPINK4O60575 86 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 DUSP14O95147 198 aaKnown RBP13.96□□□□□ -0.17
PTN-201ENST00000348225 PF4P02776 101 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 RASL11AQ6T310 242 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 FOXI2Q6ZQN5 318 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 ATP5L2Q7Z4Y8 100 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 GTSF1Q8WW33 167 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 FAM19A4Q96LR4 140 aa13.96□□□□□ -0.17
PTN-201ENST00000348225 CRISP2P16562 243 aa13.95□□□□□ -0.18
PTN-201ENST00000348225 ACTL10Q5JWF8 245 aa13.95□□□□□ -0.18
PTN-201ENST00000348225 MRPL54Q6P161 138 aaKnown RBP13.95□□□□□ -0.18
PTN-201ENST00000348225 ODF3Q96PU9 254 aa13.95□□□□□ -0.18
PTN-201ENST00000348225 TRAPPC1Q9Y5R8 145 aa13.95□□□□□ -0.18
PTN-201ENST00000348225 SAP30O75446 220 aa13.94□□□□□ -0.18
PTN-201ENST00000348225 ORM1P02763 201 aa13.94□□□□□ -0.18
PTN-201ENST00000348225 GZMBP10144 247 aa13.94□□□□□ -0.18
PTN-201ENST00000348225 FOXA3P55318 350 aaPredicted RBP13.94□□□□□ -0.18
PTN-201ENST00000348225 LINC01559Q495D7 138 aa13.94□□□□□ -0.18
PTN-201ENST00000348225 ZFAND2AQ8N6M9 145 aa13.94□□□□□ -0.18
PTN-201ENST00000348225 MT-ND6P03923 174 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 GDF5OSQ5U4N7 250 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 APRG1Q8IVJ8 170 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 PGLYRP4Q96LB8 373 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 GNB1LQ9BYB4 327 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 TMSB15BA0A087X1C1 80 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 TRAV21A0A0B4J279 112 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 GPX1P07203 203 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 CD33P20138 364 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 LEPP41159 167 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 OR2K2Q8NGT1 345 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 FRZBQ92765 325 aa13.93□□□□□ -0.18
PTN-201ENST00000348225 SNURFLB1AK76 121 aa13.92□□□□□ -0.18
PTN-201ENST00000348225 S100A6P06703 90 aa13.92□□□□□ -0.18
PTN-201ENST00000348225 DEFB131AP59861 70 aa13.92□□□□□ -0.18
PTN-201ENST00000348225 FABP9Q0Z7S8 132 aa13.92□□□□□ -0.18
PTN-201ENST00000348225 BORCS7Q96B45 105 aa13.92□□□□□ -0.18
PTN-201ENST00000348225 CITED1Q99966 193 aa13.92□□□□□ -0.18
PTN-201ENST00000348225 PHOX2AO14813 284 aa13.91□□□□□ -0.18
PTN-201ENST00000348225 PRR9Q5T870 116 aa13.91□□□□□ -0.18
PTN-201ENST00000348225 MAP6D1Q9H9H5 199 aa13.91□□□□□ -0.18
PTN-201ENST00000348225 ZNF256Q9Y2P7 627 aaPredicted RBP13.91□□□□□ -0.18
PTN-201ENST00000348225 WNK1Q9H4A3 2382 aa13.9□□□□□ -0.18
PTN-201ENST00000348225 J3KRW8 73 aa13.9□□□□□ -0.18
PTN-201ENST00000348225 HLA-DQA1P01909 254 aa13.9□□□□□ -0.18
PTN-201ENST00000348225 RAB4BP61018 213 aa13.9□□□□□ -0.18
PTN-201ENST00000348225 HBBP68871 147 aa13.9□□□□□ -0.18
PTN-201ENST00000348225 LINC00482Q8N8I6 264 aa13.9□□□□□ -0.18
PTN-201ENST00000348225 A0A1B0GXF2 115 aa13.9□□□□□ -0.19
PTN-201ENST00000348225 KLLNB2CW77 178 aa13.9□□□□□ -0.19
PTN-201ENST00000348225 TRGC1P0CF51 173 aa13.9□□□□□ -0.19
PTN-201ENST00000348225 TSPOP30536 169 aa13.9□□□□□ -0.19
PTN-201ENST00000348225 TMEM136Q6ZRR5 245 aa13.9□□□□□ -0.19
PTN-201ENST00000348225 TPPP3Q9BW30 176 aa13.9□□□□□ -0.19
PTN-201ENST00000348225 MRPL18Q9H0U6 180 aaKnown RBP13.9□□□□□ -0.19
PTN-201ENST00000348225 A0A1B0GUT8 65 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BKO60814 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 IGLV1-51P01701 117 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BJP06899 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 FRMD6-AS1P0C7T7 363 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HLA-DRB4P13762 266 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BOP23527 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BBP33778 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 RNASE4P34096 147 aaKnown RBP13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BDP58876 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BCP62807 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 RIGQ13278 110 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST2H2BEQ16778 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BHQ93079 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BNQ99877 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HIST1H2BMQ99879 126 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 HLA-DRB4X5D2U9 266 aa13.89□□□□□ -0.19
PTN-201ENST00000348225 IGKV3D-20A0A0C4DH25 116 aa13.88□□□□□ -0.19
PTN-201ENST00000348225 A0A1B0GW15 77 aa13.88□□□□□ -0.19
PTN-201ENST00000348225 S100A8P05109 93 aa13.88□□□□□ -0.19
PTN-201ENST00000348225 CAMPP49913 170 aa13.88□□□□□ -0.19
PTN-201ENST00000348225 CMC4P56277 68 aaPredicted RBP13.88□□□□□ -0.19
PTN-201ENST00000348225 FER1L6-AS1Q8NA97 138 aa13.88□□□□□ -0.19
PTN-201ENST00000348225 IGKV3-20P01619 116 aa13.87□□□□□ -0.19
PTN-201ENST00000348225 IGLC6P0CF74 106 aa13.87□□□□□ -0.19
PTN-201ENST00000348225 C11orf21Q9P2W6 132 aa13.87□□□□□ -0.19
PTN-201ENST00000348225 NIPBLQ6KC79 2804 aaeCLIP13.87□□□□□ -0.19
PTN-201ENST00000348225 KNCNA6PVL3 124 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 CTRLP40313 264 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 CDKN1BP46527 198 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 LYZL1Q6UWQ5 148 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 C7orf71A4D174 169 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 GRIFINA4D1Z8 144 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 A8MTW9 85 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 H3BMM0 161 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 ARMS2P0C7Q2 107 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 NAGKQ9UJ70 344 aa13.86□□□□□ -0.19
PTN-201ENST00000348225 LOC105371267A0A1B0GV96 52 aa13.85□□□□□ -0.19
PTN-201ENST00000348225 OR11H12B2RN74 326 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms