RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 IGFBPL1Q8WX77 278 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 C18orf15Q96N68 181 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 UBTD1Q9HAC8 227 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 FABP5P3A8MUU1 101 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 BUB1B-PAK6H3BSN5 160 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 MFAP4P55083 255 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 FXYD7P58549 80 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 FBXL15Q9H469 300 aa12.33□□□□□ -0.44
HMGA1-202ENST00000347617 IGSF10Q6WRI0 2623 aa12.32□□□□□ -0.44
HMGA1-202ENST00000347617 M0R1W7 72 aa12.32□□□□□ -0.44
HMGA1-202ENST00000347617 TCTAP57738 103 aa12.32□□□□□ -0.44
HMGA1-202ENST00000347617 TMEM158Q8WZ71 300 aa12.32□□□□□ -0.44
HMGA1-202ENST00000347617 VCX2Q9H322 139 aa12.32□□□□□ -0.44
HMGA1-202ENST00000347617 A0A087WX48 190 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 NCBP2LA6PVI3 153 aaKnown RBP12.31□□□□□ -0.44
HMGA1-202ENST00000347617 K7ERJ3 54 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 CNIH1O95406 144 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 APELAP0DMC3 54 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 WFDC2Q14508 124 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 GTSCR1Q86UQ5 136 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 MRAP2Q96G30 205 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 SPAG8Q99932 426 aaPredicted RBP12.31□□□□□ -0.44
HMGA1-202ENST00000347617 PLXNB1O43157 2135 aa12.31□□□□□ -0.44
HMGA1-202ENST00000347617 TRAV12-1A0A0B4J245 112 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 RPEQ96AT9 228 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 CACNA1BQ00975 2339 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 MALRD1Q5VYJ5 2156 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 TMEM238LA0A1B0GVL6 79 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 RBAKDNA6NC62 111 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 LY6HO94772 140 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 LAGE3Q14657 143 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 CCDC144NLQ6NUI1 221 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 ASCL2Q99929 193 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 USP24Q9UPU5 2620 aa12.3□□□□□ -0.44
HMGA1-202ENST00000347617 IGLV2-18A0A075B6J9 118 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 CKS1BP61024 79 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 SCGB2A2Q13296 93 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 LYRM7Q5U5X0 104 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 BBC3Q96PG8 261 aaPredicted RBP12.29□□□□□ -0.44
HMGA1-202ENST00000347617 HIST1H4GQ99525 98 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 PRO0461Q9UI25 63 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 SELENOKQ9Y6D0 94 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 RELNP78509 3460 aa12.29□□□□□ -0.44
HMGA1-202ENST00000347617 TRBV7-3A0A075B6L6 115 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 IGKV2-40A0A087WW87 121 aaPredicted RBP12.28□□□□□ -0.44
HMGA1-202ENST00000347617 IGKV2D-40P01614 121 aaPredicted RBP12.28□□□□□ -0.44
HMGA1-202ENST00000347617 RAB9AP51151 201 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 WFDC3Q8IUB2 231 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 OR11H6Q8NGC7 330 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 CFAP46Q8IYW2 2715 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 A6NJY4 79 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 ORM1P02763 201 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 IL17RELQ6ZVW7 336 aa12.28□□□□□ -0.44
HMGA1-202ENST00000347617 LY6LH3BQJ8 138 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 K7EMI3 77 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 PRTN3P24158 256 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 ETDBQ3ZM63 59 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 NPBQ8NG41 125 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 PSMG3-AS1Q96PY0 264 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 TMEM160Q9NX00 188 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
HMGA1-202ENST00000347617 MRPL35Q9NZE8 188 aaKnown RBP12.27□□□□□ -0.45
HMGA1-202ENST00000347617 CYSLTR1Q9Y271 337 aa12.27□□□□□ -0.45
HMGA1-202ENST00000347617 IGLV11-55A0A075B6I3 123 aa12.26□□□□□ -0.45
HMGA1-202ENST00000347617 H3BMG7 143 aa12.26□□□□□ -0.45
HMGA1-202ENST00000347617 H7C1H1 209 aa12.26□□□□□ -0.45
HMGA1-202ENST00000347617 NBR2O15453 112 aa12.26□□□□□ -0.45
HMGA1-202ENST00000347617 SLC25A16P16260 332 aa12.26□□□□□ -0.45
HMGA1-202ENST00000347617 ZNF80P51504 273 aaPredicted RBP12.26□□□□□ -0.45
HMGA1-202ENST00000347617 TRAV40A0A0B4J280 105 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.25□□□□□ -0.45
HMGA1-202ENST00000347617 NDUFA3O95167 84 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 KLRD1Q13241 179 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 C1QTNF4Q9BXJ3 329 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 OR11H12B2RN74 326 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 F8VRH5 84 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 HOXA3O43365 443 aaPredicted RBP12.25□□□□□ -0.45
HMGA1-202ENST00000347617 OR11H1Q8NG94 326 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 OR11H2Q8NH07 326 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 TTTY13Q9BZ97 58 aa12.25□□□□□ -0.45
HMGA1-202ENST00000347617 DOPEY1Q5JWR5 2465 aa12.24□□□□□ -0.45
HMGA1-202ENST00000347617 IGHV4-4A0A075B6R2 117 aa12.24□□□□□ -0.45
HMGA1-202ENST00000347617 MYMXA0A1B0GTQ4 84 aa12.24□□□□□ -0.45
HMGA1-202ENST00000347617 APOMO95445 188 aa12.24□□□□□ -0.45
HMGA1-202ENST00000347617 DLX4Q92988 240 aaPredicted RBP12.24□□□□□ -0.45
HMGA1-202ENST00000347617 C21orf62Q9NYP8 219 aa12.24□□□□□ -0.45
HMGA1-202ENST00000347617 ONECUT1Q9UBC0 465 aa12.24□□□□□ -0.45
HMGA1-202ENST00000347617 HRNRQ86YZ3 2850 aaPredicted RBP12.24□□□□□ -0.45
HMGA1-202ENST00000347617 SH2D6Q7Z4S9 175 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 ZNF575Q86XF7 245 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 MAPKAPK5-AS1Q8N8E1 139 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 SLC50A1Q9BRV3 221 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 HIF1ANQ9NWT6 349 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 MSRB1Q9NZV6 116 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 PRB1P04280 392 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 FOXI1Q12951 378 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 ORMDL2Q53FV1 153 aa12.23□□□□□ -0.45
HMGA1-202ENST00000347617 ZNF418Q8TF45 676 aaPredicted RBP12.23□□□□□ -0.45
HMGA1-202ENST00000347617 DPM3Q9P2X0 92 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms