RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 IGLC7A0M8Q6 106 aa6.21□□□□□ -1.41
KPNA1-201ENST00000344337 GAGE1Q13065 139 aa6.21□□□□□ -1.41
KPNA1-201ENST00000344337 LAGE3Q14657 143 aa6.21□□□□□ -1.41
KPNA1-201ENST00000344337 UBE2L6O14933 153 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 COX6CP09669 75 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 C10orf126Q8N4M7 172 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 VCX2Q9H322 139 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 HIVEP2P31629 2446 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 CSMD1Q96PZ7 3565 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 CD5LO43866 347 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 ZNF876PQ49A33 203 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 C19orf54Q5BKX5 351 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 VMO1Q7Z5L0 202 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 EEF1AKMT3Q96AZ1 226 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 SRSF1Q07955 248 aaKnown RBP eCLIP6.21□□□□□ -1.42
KPNA1-201ENST00000344337 Q71RC1 249 aaPredicted RBP6.21□□□□□ -1.42
KPNA1-201ENST00000344337 TM4SF5O14894 197 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 TP53TG3Q9ULZ0 132 aa6.21□□□□□ -1.42
KPNA1-201ENST00000344337 AKAP13Q12802 2813 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 NAV2Q8IVL1 2488 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 SEC11AP67812 179 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 TCF15Q12870 199 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 MSMPQ1L6U9 139 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 NPFFR1Q9GZQ6 430 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 C7orf69Q9H7B7 122 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 MRPS16Q9Y3D3 137 aaKnown RBP6.2□□□□□ -1.42
KPNA1-201ENST00000344337 TRAV9-1A0A075B6T8 112 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 E7EQL1 145 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 FXYD2P54710 66 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 TNFRSF18Q9Y5U5 241 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 BUB1B-PAK6H3BSN5 160 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 EGR2P11161 476 aaPredicted RBP6.2□□□□□ -1.42
KPNA1-201ENST00000344337 PATE2Q6UY27 113 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 GNRH2O43555 120 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 PRSS33Q8NF86 280 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 LINC01587Q99440 93 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 FOXL2NBQ6ZUU3 175 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 NDUFA4L2Q9NRX3 87 aa6.2□□□□□ -1.42
KPNA1-201ENST00000344337 BRWD1-AS2P59051 145 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 MDS2Q8NDY4 140 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 RPL39LQ96EH5 51 aaKnown RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 TRAV13-1A0A0B4J241 112 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 C9orf118A6NHY6 69 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 H7C1H1 209 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 NPFFO15130 113 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 TOMM40O96008 361 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 CD28P10747 220 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 NRN1LQ496H8 165 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 OR4X2Q8NGF9 303 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 TAX1BP3O14907 124 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 SPINK13Q1W4C9 94 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 TNRC18O15417 2968 aaPredicted RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 A8MWV9 139 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 PROP1O75360 226 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 SPAG8Q99932 426 aaPredicted RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 MRPL27Q9P0M9 148 aaKnown RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 DAND5Q8N907 189 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 A0A1W2PPM0 123 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 B5MCH6 92 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 C22orf46C9J442 243 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 HOXB4P17483 251 aaPredicted RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 RPS20P60866 119 aaKnown RBP6.19□□□□□ -1.42
KPNA1-201ENST00000344337 SIGLEC15Q6ZMC9 328 aa6.19□□□□□ -1.42
KPNA1-201ENST00000344337 ID1P41134 155 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 C22orf34Q6ZV56 151 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 TNFRSF14Q92956 283 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 PLSCR4Q9NRQ2 329 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 IGLV3-9A0A075B6K5 115 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 TRBV7-9A0A0J9YWB2 115 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 COX8AP10176 69 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 MS4A6AQ9H2W1 248 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 SPATA12Q7Z6I5 190 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 B9A039 149 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 TMEM238C9JI98 176 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 PAX1P15863 534 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 PAX8Q06710 450 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 RRN3P1Q2M238 152 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 DTX2Q86UW9 622 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 ZNF462Q96JM2 2506 aa6.18□□□□□ -1.42
KPNA1-201ENST00000344337 TRBV6-6A0A0A6YYG2 114 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 GAGE12HA6NDE8 117 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 FAM90A9PA6NNJ1 464 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 DNAL4O96015 105 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 GAGE2BQ13066 116 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 GAGE2EQ4V326 116 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 NUP37Q8NFH4 326 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 FAM57AQ8TBR7 257 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 GAGE2DQ9UEU5 116 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 ERG28Q9UKR5 140 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRR20EP86478 221 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRR20CP86479 221 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRR20DP86480 221 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRR20BP86481 221 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRR20AP86496 221 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 SRSF7Q16629 238 aaKnown RBP eCLIP6.17□□□□□ -1.42
KPNA1-201ENST00000344337 DYNAPQ8N1N2 210 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 TMEM167AQ8TBQ9 72 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 EDA2RQ9HAV5 297 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 NXT2Q9NPJ8 142 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms