RNA–Protein interactions for RNA: ENST00000343916.7

COL9A3-201, Transcript of collagen type IX alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A3, Length 2,485 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-201ENST00000343916 TMEM191AQ9H0A3 160 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 FAM223BA6NKX1 122 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 FXYD7P58549 80 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 SLC25A34Q6PIV7 304 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 LCNL1Q6ZST4 164 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 FAM223AQ8IWN6 122 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 ORMDL3Q8N138 153 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 PSMG3-AS1Q96PY0 264 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 SIGLEC8Q9NYZ4 499 aa14.84□□□□□ -0.03
COL9A3-201ENST00000343916 NCR2O95944 276 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 IGHV3-11P01762 117 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 RPS20P60866 119 aaKnown RBP14.83□□□□□ -0.04
COL9A3-201ENST00000343916 Q6ZQT7 251 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 U3KQE9 123 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 HSBP1L1C9JCN9 74 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 NDUFS8O00217 210 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 EPG5Q9HCE0 2579 aa14.83□□□□□ -0.04
COL9A3-201ENST00000343916 RBAKDNA6NC62 111 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 AVPP01185 164 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 MSMBP08118 114 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 KLK15Q9H2R5 256 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 C11orf21Q9P2W6 132 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 HSPB8Q9UJY1 196 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 U3KQK5 164 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 TAX1BP3O14907 124 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 SMAD7O15105 426 aaKnown RBP14.82□□□□□ -0.04
COL9A3-201ENST00000343916 CRIP2P52943 208 aaPredicted RBP14.82□□□□□ -0.04
COL9A3-201ENST00000343916 BVES-AS1Q5T3Y7 98 aa14.82□□□□□ -0.04
COL9A3-201ENST00000343916 A0A096LNJ9 63 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 SCRT2Q9NQ03 307 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 HIF1ANQ9NWT6 349 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 IGKV3D-20A0A0C4DH25 116 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 CBY3A6NI87 242 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 NPYP01303 97 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 IGF1P05019 195 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 CKS2P33552 79 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 OR10AG1Q8NH19 301 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 ZNF747Q9BV97 191 aa14.81□□□□□ -0.04
COL9A3-201ENST00000343916 K7EP13 123 aa14.8□□□□□ -0.04
COL9A3-201ENST00000343916 GAS8-AS1O95177 125 aa14.8□□□□□ -0.04
COL9A3-201ENST00000343916 LINC01559Q495D7 138 aa14.8□□□□□ -0.04
COL9A3-201ENST00000343916 TMEM78Q5T7P6 136 aa14.8□□□□□ -0.04
COL9A3-201ENST00000343916 C16orf92Q96LL3 132 aa14.8□□□□□ -0.04
COL9A3-201ENST00000343916 SELENOKQ9Y6D0 94 aa14.8□□□□□ -0.04
COL9A3-201ENST00000343916 A6NDX4 124 aa14.79□□□□□ -0.04
COL9A3-201ENST00000343916 IGHG2P01859 326 aa14.79□□□□□ -0.04
COL9A3-201ENST00000343916 PET117Q6UWS5 81 aa14.79□□□□□ -0.04
COL9A3-201ENST00000343916 PRSS57Q6UWY2 283 aa14.79□□□□□ -0.04
COL9A3-201ENST00000343916 GLMPQ8WWB7 406 aa14.79□□□□□ -0.04
COL9A3-201ENST00000343916 USP9YO00507 2555 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-201ENST00000343916 PF4V1P10720 104 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 FOXE3Q13461 319 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 RNF151Q2KHN1 245 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 C20orf173Q96LM9 149 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 POLQO75417 2590 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 FAM208BQ5VWN6 2430 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 SRSF2Q01130 221 aaKnown RBP14.78□□□□□ -0.04
COL9A3-201ENST00000343916 RNF185Q96GF1 192 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 ZNF462Q96JM2 2506 aa14.78□□□□□ -0.04
COL9A3-201ENST00000343916 SNAI2O43623 268 aa14.77□□□□□ -0.04
COL9A3-201ENST00000343916 DEFB1P60022 68 aa14.77□□□□□ -0.04
COL9A3-201ENST00000343916 CNFNQ9BYD5 112 aa14.77□□□□□ -0.04
COL9A3-201ENST00000343916 J3KRW8 73 aa14.77□□□□□ -0.05
COL9A3-201ENST00000343916 OR8A1Q8NGG7 326 aa14.77□□□□□ -0.05
COL9A3-201ENST00000343916 GPHB5Q86YW7 130 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 DEFB125Q8N687 156 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 IGKV3-7A0A075B6H7 116 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 LINC01545Q5VT33 79 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 C9orf47Q6ZRZ4 202 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 ATP6V0BQ99437 205 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 CENPEQ02224 2701 aa14.76□□□□□ -0.05
COL9A3-201ENST00000343916 C12orf54Q6X4T0 127 aa14.75□□□□□ -0.05
COL9A3-201ENST00000343916 ZANQ9Y493 2812 aa14.75□□□□□ -0.05
COL9A3-201ENST00000343916 NDUFA4O00483 81 aa14.75□□□□□ -0.05
COL9A3-201ENST00000343916 TMEM95Q3KNT9 176 aa14.75□□□□□ -0.05
COL9A3-201ENST00000343916 PRR9Q5T870 116 aa14.75□□□□□ -0.05
COL9A3-201ENST00000343916 MRPL53Q96EL3 112 aaKnown RBP14.75□□□□□ -0.05
COL9A3-201ENST00000343916 FBN2P35556 2912 aa14.75□□□□□ -0.05
COL9A3-201ENST00000343916 CDKN1BP46527 198 aa14.74□□□□□ -0.05
COL9A3-201ENST00000343916 RPL11P62913 178 aaKnown RBP14.74□□□□□ -0.05
COL9A3-201ENST00000343916 AMMECR1LQ6DCA0 310 aa14.74□□□□□ -0.05
COL9A3-201ENST00000343916 OR4X2Q8NGF9 303 aa14.74□□□□□ -0.05
COL9A3-201ENST00000343916 B4DSR2 109 aa14.74□□□□□ -0.05
COL9A3-201ENST00000343916 GATA1P15976 413 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-201ENST00000343916 EVI2AP22794 236 aa14.74□□□□□ -0.05
COL9A3-201ENST00000343916 HIST1H1AQ02539 215 aaPredicted RBP14.74□□□□□ -0.05
COL9A3-201ENST00000343916 ZNF843Q8N446 348 aa14.73□□□□□ -0.05
COL9A3-201ENST00000343916 MS4A6AQ9H2W1 248 aa14.73□□□□□ -0.05
COL9A3-201ENST00000343916 C9orf139Q6ZV77 190 aa14.73□□□□□ -0.05
COL9A3-201ENST00000343916 MAPK1IP1LQ8NDC0 245 aa14.73□□□□□ -0.05
COL9A3-201ENST00000343916 USMG5Q96IX5 58 aa14.73□□□□□ -0.05
COL9A3-201ENST00000343916 IGHV7-4-1A0A0J9YVY3 117 aa14.72□□□□□ -0.05
COL9A3-201ENST00000343916 TCTAP57738 103 aa14.72□□□□□ -0.05
COL9A3-201ENST00000343916 WFDC3Q8IUB2 231 aa14.72□□□□□ -0.05
COL9A3-201ENST00000343916 NPFFR1Q9GZQ6 430 aa14.72□□□□□ -0.05
COL9A3-201ENST00000343916 ANKRD17O75179 2603 aaKnown RBP14.72□□□□□ -0.05
COL9A3-201ENST00000343916 TM4SF20Q53R12 229 aa14.71□□□□□ -0.05
COL9A3-201ENST00000343916 LRRK2Q5S007 2527 aa14.71□□□□□ -0.05
COL9A3-201ENST00000343916 C2orf91Q6ZV80 131 aa14.71□□□□□ -0.05
COL9A3-201ENST00000343916 HBDP02042 147 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms