RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 UMAD1C9J7I0 102 aa12.79□□□□□ -0.36
USF2-202ENST00000343550 DNAH10Q8IVF4 4471 aa12.79□□□□□ -0.36
USF2-202ENST00000343550 CCDC28AQ8IWP9 274 aa12.79□□□□□ -0.36
USF2-202ENST00000343550 C5orf17Q8NAS9 161 aa12.79□□□□□ -0.36
USF2-202ENST00000343550 TMEM263Q8WUH6 116 aaKnown RBP12.79□□□□□ -0.36
USF2-202ENST00000343550 DEFB131BA0A096LNP1 70 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 MAP1LC3B2A6NCE7 125 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 LYRM9A8MSI8 78 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 GGTLC3B5MD39 225 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 TPT1P13693 172 aaKnown RBP12.78□□□□□ -0.36
USF2-202ENST00000343550 Q6ZQT7 251 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 MAP1LC3BQ9GZQ8 125 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 EPDR1Q9UM22 224 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 TIMM8BQ9Y5J9 83 aaPredicted RBP12.78□□□□□ -0.36
USF2-202ENST00000343550 TRAV8-1A0A0A6YYK1 113 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 TCRAP04437 139 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 STOML3Q8TAV4 291 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
USF2-202ENST00000343550 DAD1P61803 113 aa12.77□□□□□ -0.37
USF2-202ENST00000343550 MBD3L1Q8WWY6 194 aa12.77□□□□□ -0.37
USF2-202ENST00000343550 TVP23CQ96ET8 276 aa12.77□□□□□ -0.37
USF2-202ENST00000343550 SERTM2A0A1B0GWG4 89 aa12.76□□□□□ -0.37
USF2-202ENST00000343550 UBE2G2P60604 165 aa12.76□□□□□ -0.37
USF2-202ENST00000343550 SGK494Q96LW2 274 aa12.76□□□□□ -0.37
USF2-202ENST00000343550 NOP10Q9NPE3 64 aaKnown RBP12.76□□□□□ -0.37
USF2-202ENST00000343550 FAM74A7A6NL05 159 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 DEFB130BP0DP73 79 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 DEFB130AP0DP74 79 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 DPPA3Q6W0C5 159 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 EIF4E3Q8N5X7 224 aaKnown RBP12.75□□□□□ -0.37
USF2-202ENST00000343550 FAM213BQ8TBF2 198 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 SFT2D1Q8WV19 159 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 KRTAP17-1Q9BYP8 105 aa12.75□□□□□ -0.37
USF2-202ENST00000343550 NKX6-2Q9C056 277 aaPredicted RBP12.75□□□□□ -0.37
USF2-202ENST00000343550 K7EQM0 130 aa12.74□□□□□ -0.37
USF2-202ENST00000343550 ANXA2RQ3ZCQ2 193 aa12.74□□□□□ -0.37
USF2-202ENST00000343550 Q6AWC8 147 aa12.74□□□□□ -0.37
USF2-202ENST00000343550 CBY3A6NI87 242 aa12.73□□□□□ -0.37
USF2-202ENST00000343550 RGS13O14921 159 aa12.73□□□□□ -0.37
USF2-202ENST00000343550 IGLV2-11P01706 119 aa12.73□□□□□ -0.37
USF2-202ENST00000343550 TREM1Q9NP99 234 aa12.73□□□□□ -0.37
USF2-202ENST00000343550 IGHV1OR15-1A0A075B7D0 117 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 SNURFLB1AK76 121 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 IFNA7P01567 189 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 CYB561D1Q8N8Q1 229 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 C11orf72Q8NBR9 251 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 ATG101Q9BSB4 218 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 NDUFAF3Q9BU61 184 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 GSN-AS1Q9NRJ2 163 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 TP53TG3Q9ULZ0 132 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 HECTD4Q9Y4D8 3996 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 DNAH6Q9C0G6 4158 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 H2AFB1P0C5Y9 115 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 HTN3P15516 51 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 DAZ2Q13117 558 aaKnown RBP12.72□□□□□ -0.37
USF2-202ENST00000343550 EIF5AL1Q6IS14 154 aaKnown RBP12.72□□□□□ -0.37
USF2-202ENST00000343550 SLC51BQ86UW2 128 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 C9orf62Q8N4C0 152 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 LINC00479Q96M42 142 aa12.72□□□□□ -0.37
USF2-202ENST00000343550 P0DMU3 169 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 FAM231AP0DMU4 169 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 FAM231CP0DMU5 169 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 FLI1Q01543 452 aaPredicted RBP12.71□□□□□ -0.38
USF2-202ENST00000343550 LINC00612Q8N6U2 182 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 POM121L12Q8N7R1 296 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 TMEM75Q8N9X5 138 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 ZNF680Q8NEM1 530 aa12.71□□□□□ -0.38
USF2-202ENST00000343550 FBLL1A6NHQ2 334 aaKnown RBP12.7□□□□□ -0.38
USF2-202ENST00000343550 RAB5CP51148 216 aa12.7□□□□□ -0.38
USF2-202ENST00000343550 ZFP69Q49AA0 526 aa12.7□□□□□ -0.38
USF2-202ENST00000343550 MUC21Q5SSG8 566 aa12.7□□□□□ -0.38
USF2-202ENST00000343550 PRNTQ86SH4 94 aa12.7□□□□□ -0.38
USF2-202ENST00000343550 HIST1H2BAQ96A08 127 aa12.7□□□□□ -0.38
USF2-202ENST00000343550 TRAV34A0A0B4J273 112 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 A0A1B0GV50 99 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 F6UZH7 168 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 IBA57Q5T440 356 aaKnown RBP12.69□□□□□ -0.38
USF2-202ENST00000343550 CST9LP1Q5W188 147 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 LINC00336Q6ZUF6 198 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 FAM210BQ96KR6 192 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 C8orf49Q96NF6 230 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 NDFIP1Q9BT67 221 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 KLF12Q9Y4X4 402 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 ARL2-SNX15V9GYD0 113 aa12.69□□□□□ -0.38
USF2-202ENST00000343550 TRAV21A0A0B4J279 112 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 PEX7O00628 323 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 PAGE4O60829 102 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 ATP5G1P05496 136 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 ATP5G3P48201 142 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 SULT1A2P50226 295 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 FAM159AQ6UWV7 190 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 HERC2O95714 4834 aa12.68□□□□□ -0.38
USF2-202ENST00000343550 GAGE12BA1L429 117 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 GAGE7O76087 117 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 GAGE12FP0CL80 117 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 GAGE12GP0CL81 117 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 GAGE12IP0CL82 117 aa12.67□□□□□ -0.38
USF2-202ENST00000343550 ZNF80P51504 273 aaPredicted RBP12.67□□□□□ -0.38
USF2-202ENST00000343550 TCL1AP56279 114 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms