RNA–Protein interactions for RNA: ENST00000343115.8

RDX-201, Transcript of radixin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RDX, Length 4,491 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-201ENST00000343115 BEX4Q9NWD9 120 aaPredicted RBP12.85□□□□□ -0.35
RDX-201ENST00000343115 DSPP15924 2871 aaKnown RBP12.85□□□□□ -0.35
RDX-201ENST00000343115 FAM110DQ8TAY7 271 aaPredicted RBP12.84□□□□□ -0.35
RDX-201ENST00000343115 RHPN1-AS1Q9BWJ2 59 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 MRPL16Q9NX20 251 aaKnown RBP12.84□□□□□ -0.35
RDX-201ENST00000343115 HSD52Q0P140 79 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 IGF2-ASQ6U949 168 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 TMEM238LA0A1B0GVL6 79 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 A6NJY4 79 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 LGALS3P17931 250 aaKnown RBP12.84□□□□□ -0.35
RDX-201ENST00000343115 SEC11AP67812 179 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 ABCA12Q86UK0 2595 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 TRBV7-1A0A0A6YYK4 115 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 C8orf86Q6ZUL3 223 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 RNF114Q9Y508 228 aa12.84□□□□□ -0.35
RDX-201ENST00000343115 NBEAQ8NFP9 2946 aa12.83□□□□□ -0.35
RDX-201ENST00000343115 KIR3DS1Q14943 382 aa12.83□□□□□ -0.36
RDX-201ENST00000343115 LINC00574Q9H8X3 128 aa12.83□□□□□ -0.36
RDX-201ENST00000343115 IGHV3-64A0A075B6Q5 118 aa12.83□□□□□ -0.36
RDX-201ENST00000343115 A0A087WWL8 130 aa12.83□□□□□ -0.36
RDX-201ENST00000343115 RIPPLY3P57055 190 aa12.83□□□□□ -0.36
RDX-201ENST00000343115 IGHV2-70DA0A0C4DH43 119 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 CIDEAO60543 219 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 KLF5Q13887 457 aaPredicted RBP12.82□□□□□ -0.36
RDX-201ENST00000343115 ZNF418Q8TF45 676 aaPredicted RBP12.82□□□□□ -0.36
RDX-201ENST00000343115 ZNF747Q9BV97 191 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 CRYGCP07315 174 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 C9orf139Q6ZV77 190 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 DKK2Q9UBU2 259 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 KLF12Q9Y4X4 402 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 HIVEP2P31629 2446 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 IGHV7-81A0A0B4J1V7 117 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 CTSGP08311 255 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
RDX-201ENST00000343115 MRPL52Q86TS9 123 aaKnown RBP12.82□□□□□ -0.36
RDX-201ENST00000343115 CHTOPQ9Y3Y2 248 aaKnown RBP12.82□□□□□ -0.36
RDX-201ENST00000343115 TNRC18O15417 2968 aaPredicted RBP12.82□□□□□ -0.36
RDX-201ENST00000343115 PSMB11A5LHX3 300 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 F6UB75 175 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 LYRM7Q5U5X0 104 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 OR11H6Q8NGC7 330 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 AGPAT4-IT1Q9H0P7 198 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 COL4A2P08572 1712 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 FASNP49327 2511 aaKnown RBP12.81□□□□□ -0.36
RDX-201ENST00000343115 IGHV3-73A0A0B4J1V6 119 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 PRAC2D3DTV9 90 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 OVOL1O14753 267 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 SMAD7O15105 426 aaKnown RBP12.81□□□□□ -0.36
RDX-201ENST00000343115 OR9G4Q8NGQ1 327 aa12.81□□□□□ -0.36
RDX-201ENST00000343115 ITLN2Q8WWU7 325 aaPredicted RBP12.81□□□□□ -0.36
RDX-201ENST00000343115 TET2Q6N021 2002 aaPredicted RBP12.81□□□□□ -0.36
RDX-201ENST00000343115 DTX2Q86UW9 622 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 GAGE12BA1L429 117 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 ZFP36P26651 326 aaKnown RBP12.8□□□□□ -0.36
RDX-201ENST00000343115 FOXE3Q13461 319 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 NEGR1Q7Z3B1 354 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 PKD1L2Q7Z442 2459 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 FREM2Q5SZK8 3169 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 IGLV11-55A0A075B6I3 123 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 A0A1B0GWB2 263 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 A0A1W2PRX2 142 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 TMEM8BA6NDV4 472 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 ZNF815PA8K554 130 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 SAMD5Q5TGI4 173 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 DEFB1P60022 68 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 ORMDL2Q53FV1 153 aa12.8□□□□□ -0.36
RDX-201ENST00000343115 INS-IGF2F8WCM5 200 aa12.79□□□□□ -0.36
RDX-201ENST00000343115 CD5LO43866 347 aa12.79□□□□□ -0.36
RDX-201ENST00000343115 ESDP10768 282 aa12.79□□□□□ -0.36
RDX-201ENST00000343115 HOXB4P17483 251 aaPredicted RBP12.79□□□□□ -0.36
RDX-201ENST00000343115 IGKV3OR2-268A0A0C4DH90 116 aa12.79□□□□□ -0.36
RDX-201ENST00000343115 ADORA2A-AS1P86434 159 aa12.79□□□□□ -0.36
RDX-201ENST00000343115 PRB1P04280 392 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 FANCD2OSQ96PS1 177 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 DUX3Q96PT4 197 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 PAX1P15863 534 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 CSTL1Q9H114 145 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 ANKRD39Q53RE8 183 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 BVES-AS1Q5T3Y7 98 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 PCP2Q8IVA1 136 aa12.78□□□□□ -0.36
RDX-201ENST00000343115 IGKV3D-20A0A0C4DH25 116 aa12.77□□□□□ -0.36
RDX-201ENST00000343115 NPIPB6E9PJ23 425 aa12.77□□□□□ -0.36
RDX-201ENST00000343115 COX8AP10176 69 aa12.77□□□□□ -0.36
RDX-201ENST00000343115 ZNF479Q96JC4 524 aa12.77□□□□□ -0.36
RDX-201ENST00000343115 LINC00477Q96M19 166 aa12.77□□□□□ -0.36
RDX-201ENST00000343115 TTTY13Q9BZ97 58 aa12.77□□□□□ -0.36
RDX-201ENST00000343115 PPP1R17O96001 155 aa12.77□□□□□ -0.37
RDX-201ENST00000343115 CFHR4Q92496 578 aa12.77□□□□□ -0.37
RDX-201ENST00000343115 DPH3P1Q9H4G8 78 aa12.77□□□□□ -0.37
RDX-201ENST00000343115 C19orf71A6NCJ1 209 aa12.77□□□□□ -0.37
RDX-201ENST00000343115 SP5Q6BEB4 398 aaPredicted RBP12.76□□□□□ -0.37
RDX-201ENST00000343115 MTURNQ8N3F0 131 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 ZNF292O60281 2723 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 IGHV1-69DA0A0B4J2H0 117 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 C2orf70A6NJV1 201 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 IGHV1-69P01742 117 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 MRPL35Q9NZE8 188 aaKnown RBP12.76□□□□□ -0.37
RDX-201ENST00000343115 LINC00310P59036 64 aa12.76□□□□□ -0.37
RDX-201ENST00000343115 LOXL1Q08397 574 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms