RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 ZFP2Q6ZN57 461 aa11.84□□□□□ -0.51
SNX18-202ENST00000343017 NXT2Q9NPJ8 142 aaKnown RBP11.84□□□□□ -0.51
SNX18-202ENST00000343017 MRPL16Q9NX20 251 aaKnown RBP11.84□□□□□ -0.51
SNX18-202ENST00000343017 ARHGAP32A7KAX9 2087 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 TRBV7-3A0A075B6L6 115 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 SHISA9B4DS77 424 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 TMEM178BH3BS89 294 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 XGP55808 180 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 SRSF1Q07955 248 aaKnown RBP eCLIP11.83□□□□□ -0.52
SNX18-202ENST00000343017 LOC107984156A0A0G2JMH3 177 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 C17orf100A8MU93 164 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 VSTM5A8MXK1 200 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 CEACAM4O75871 244 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 ATP5LO75964 103 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 TGFAP01135 160 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 GFRALQ6UXV0 394 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 Q6ZQT7 251 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 ARL17AQ8IVW1 177 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 MYOZ3Q8TDC0 251 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 RPEQ96AT9 228 aa11.83□□□□□ -0.52
SNX18-202ENST00000343017 PRAC2D3DTV9 90 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 PSMB2P49721 201 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 RNF183Q96D59 192 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 SPRY2O43597 315 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 TMEM155Q4W5P6 130 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 ABCA4P78363 2273 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 IGLV2-18A0A075B6J9 118 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 HOXA3O43365 443 aaPredicted RBP11.82□□□□□ -0.52
SNX18-202ENST00000343017 IGHG4P01861 327 aa11.82□□□□□ -0.52
SNX18-202ENST00000343017 ADIPOQQ15848 244 aa11.81□□□□□ -0.52
SNX18-202ENST00000343017 Q8N8P6 123 aa11.81□□□□□ -0.52
SNX18-202ENST00000343017 FAM215AQ9Y5M1 114 aa11.81□□□□□ -0.52
SNX18-202ENST00000343017 LRBAP50851 2863 aa11.81□□□□□ -0.52
SNX18-202ENST00000343017 SPTBN1Q01082 2364 aaKnown RBP11.81□□□□□ -0.52
SNX18-202ENST00000343017 LINC01549A6NIU2 74 aa11.81□□□□□ -0.52
SNX18-202ENST00000343017 UFC1Q9Y3C8 167 aa11.81□□□□□ -0.52
SNX18-202ENST00000343017 NCBP2LA6PVI3 153 aaKnown RBP11.8□□□□□ -0.52
SNX18-202ENST00000343017 HLA-DRB4P13762 266 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 HLA-DRB4X5D2U9 266 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 MED13LQ71F56 2210 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 A0A087WX48 190 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 DYNAPQ8N1N2 210 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 RNF182Q8N6D2 247 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 CFHR4Q92496 578 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 SMAD5-AS1Q9Y6J3 95 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 MBD3L4A6NDZ8 208 aaPredicted RBP11.8□□□□□ -0.52
SNX18-202ENST00000343017 MBD3L3A6NE82 208 aaPredicted RBP11.8□□□□□ -0.52
SNX18-202ENST00000343017 MBD3L5A6NJ08 208 aaPredicted RBP11.8□□□□□ -0.52
SNX18-202ENST00000343017 MBD3L2Q8NHZ7 208 aaPredicted RBP11.8□□□□□ -0.52
SNX18-202ENST00000343017 DEFB104AQ8WTQ1 72 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 PSMG3-AS1Q96PY0 264 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 C11orf21Q9P2W6 132 aa11.8□□□□□ -0.52
SNX18-202ENST00000343017 DCHS2Q6V1P9 2916 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 LYNX1G3V0Z9 82 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 LYNX1P0DP58 116 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 Q6ZUT4 128 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 SS18L2Q9UHA2 77 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 BUB1B-PAK6H3BSN5 160 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 THBDP07204 575 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 LAGE3Q14657 143 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 TAL2Q16559 108 aa11.79□□□□□ -0.52
SNX18-202ENST00000343017 ZNF48Q96MX3 618 aaPredicted RBP11.79□□□□□ -0.52
SNX18-202ENST00000343017 FABP5P3A8MUU1 101 aa11.78□□□□□ -0.52
SNX18-202ENST00000343017 IL17RELQ6ZVW7 336 aa11.78□□□□□ -0.52
SNX18-202ENST00000343017 C8orf31Q8N9H6 132 aa11.78□□□□□ -0.52
SNX18-202ENST00000343017 SRSF8Q9BRL6 282 aaKnown RBP11.78□□□□□ -0.52
SNX18-202ENST00000343017 IGHV3-66A0A0C4DH42 116 aa11.78□□□□□ -0.52
SNX18-202ENST00000343017 MYMXA0A1B0GTQ4 84 aa11.78□□□□□ -0.52
SNX18-202ENST00000343017 IGLV1-47P01700 117 aa11.78□□□□□ -0.52
SNX18-202ENST00000343017 IGHV3OR16-13A0A075B7E8 117 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 IGHV3-74A0A0B4J1X5 117 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 OR11H12B2RN74 326 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 TNFRSF13BO14836 293 aaPredicted RBP11.77□□□□□ -0.52
SNX18-202ENST00000343017 LGALS1P09382 135 aaKnown RBP11.77□□□□□ -0.52
SNX18-202ENST00000343017 PDE6HQ13956 83 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 OR11H1Q8NG94 326 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 OR11H2Q8NH07 326 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 PLEKHB2Q96CS7 222 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 KIR2DL4Q99706 377 aa11.77□□□□□ -0.52
SNX18-202ENST00000343017 IGKV3D-20A0A0C4DH25 116 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 PRSS29PA6NIE9 313 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 ANXA2RQ3ZCQ2 193 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 PSMG4Q5JS54 123 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 NRACQ8N912 160 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 KLHL30-AS1Q8NEE0 82 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 AKAP6Q13023 2319 aa11.77□□□□□ -0.53
SNX18-202ENST00000343017 TIMM23O14925 209 aa11.76□□□□□ -0.53
SNX18-202ENST00000343017 KLRD1Q13241 179 aa11.76□□□□□ -0.53
SNX18-202ENST00000343017 VKORC1Q9BQB6 163 aa11.76□□□□□ -0.53
SNX18-202ENST00000343017 F8W735 103 aaPredicted RBP11.76□□□□□ -0.53
SNX18-202ENST00000343017 DLX4Q92988 240 aaPredicted RBP11.75□□□□□ -0.53
SNX18-202ENST00000343017 H3BVH4 76 aa11.75□□□□□ -0.53
SNX18-202ENST00000343017 BSPH1Q075Z2 132 aa11.75□□□□□ -0.53
SNX18-202ENST00000343017 TMEM78Q5T7P6 136 aa11.75□□□□□ -0.53
SNX18-202ENST00000343017 FANCD2OSQ96PS1 177 aa11.75□□□□□ -0.53
SNX18-202ENST00000343017 CNFNQ9BYD5 112 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms