RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 C2orf70A6NJV1 201 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 INS-IGF2F8WCM5 200 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 J3KRW8 73 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 HOXA3O43365 443 aaPredicted RBP10.19□□□□□ -0.78
COL18A1-201ENST00000342220 SRD5A1P18405 259 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 CAMPP49913 170 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 CD300EQ496F6 205 aaPredicted RBP10.19□□□□□ -0.78
COL18A1-201ENST00000342220 EXOC3-AS1Q8N2X6 119 aa10.19□□□□□ -0.78
COL18A1-201ENST00000342220 GRAMD2BQ96HH9 432 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 C17orf77Q96MU5 243 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 TRAV41A0A0B4J266 112 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 VWC2LB2RUY7 222 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 SMIM17P0DL12 118 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 DSCR9P59020 149 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 THAP8Q8NA92 274 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 FANCD2OSQ96PS1 177 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 ZNF469Q96JG9 3925 aaPredicted RBP10.18□□□□□ -0.78
COL18A1-201ENST00000342220 HIGD1CA8MV81 97 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 TMEM97Q5BJF2 176 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 FAM231DQ6ZW35 169 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 WFDC3Q8IUB2 231 aa10.18□□□□□ -0.78
COL18A1-201ENST00000342220 TRAV8-1A0A0A6YYK1 113 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 IGKV1-17P01599 117 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 IGHV4-31P0DP07 118 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 LINC00173Q6ZV60 143 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 BPIFA4PQ86YQ2 179 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 MRAP2Q96G30 205 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 A0A1W2PRX2 142 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 GATA3P23771 443 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 MYCNOSP40205 109 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 TCTAP57738 103 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 NPBQ8NG41 125 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 WIPF2Q8TF74 440 aaPredicted RBP10.17□□□□□ -0.78
COL18A1-201ENST00000342220 RNF125Q96EQ8 232 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 RNF5Q99942 180 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 TPPP3Q9BW30 176 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 EPDR1Q9UM22 224 aa10.17□□□□□ -0.78
COL18A1-201ENST00000342220 ZNF785A8K8V0 405 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 OOSP1A8MZH6 123 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 I3L2K1 104 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 M0R3E3 92 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 NDUFA3O95167 84 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 C5orf56Q8N8D9 126 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 DUX3Q96PT4 197 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 TRBV12-3P01733 135 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 HERV-K104P63124 156 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 AJUBAQ96IF1 538 aa10.16□□□□□ -0.78
COL18A1-201ENST00000342220 SEC11AP67812 179 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 LINC00322Q6ZN03 302 aaPredicted RBP10.15□□□□□ -0.78
COL18A1-201ENST00000342220 PSMG3-AS1Q96PY0 264 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 TMEM191AQ9H0A3 160 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 SCRT2Q9NQ03 307 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 A6NDN8 102 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 ATP5G2Q06055 141 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 KIR3DS1Q14943 382 aa10.15□□□□□ -0.78
COL18A1-201ENST00000342220 RASL11AQ6T310 242 aa10.15□□□□□ -0.79
COL18A1-201ENST00000342220 SLC25A39Q9BZJ4 359 aaPredicted RBP10.15□□□□□ -0.79
COL18A1-201ENST00000342220 OR5A1Q8NGJ0 315 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 PIFOQ8TCI5 191 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.14□□□□□ -0.79
COL18A1-201ENST00000342220 H3BRM9 83 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 SYS1-DBNDD2H3BUS1 97 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 EGR2P11161 476 aaPredicted RBP10.14□□□□□ -0.79
COL18A1-201ENST00000342220 ADAMTSL5Q6ZMM2 481 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 HLA-DRB1P01911 266 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 TCTEX1D4Q5JR98 221 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 GOLT1AQ6ZVE7 132 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 TMEM116Q8NCL8 245 aa10.14□□□□□ -0.79
COL18A1-201ENST00000342220 J3QR89 54 aa10.13□□□□□ -0.79
COL18A1-201ENST00000342220 CRYGCP07315 174 aa10.13□□□□□ -0.79
COL18A1-201ENST00000342220 FABP2P12104 132 aa10.13□□□□□ -0.79
COL18A1-201ENST00000342220 GPR82Q96P67 336 aa10.13□□□□□ -0.79
COL18A1-201ENST00000342220 TMSB15BA0A087X1C1 80 aa10.13□□□□□ -0.79
COL18A1-201ENST00000342220 PGPEP1Q9NXJ5 209 aa10.13□□□□□ -0.79
COL18A1-201ENST00000342220 A0A1W2PPM0 123 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 HLA-DMBP28068 263 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 FOXA3P55318 350 aaPredicted RBP10.12□□□□□ -0.79
COL18A1-201ENST00000342220 KLF5Q13887 457 aaPredicted RBP10.12□□□□□ -0.79
COL18A1-201ENST00000342220 PRNTQ86SH4 94 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 KLF12Q9Y4X4 402 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 IGLV11-55A0A075B6I3 123 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 A0A1B0GXF2 115 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 LEPROTL1O95214 131 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 DEFB136Q30KP8 78 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 C2orf91Q6ZV80 131 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 GTSF1Q8WW33 167 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 PGLYRP4Q96LB8 373 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 TRGV9Q99603 122 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 RPP21Q9H633 154 aaKnown RBP10.12□□□□□ -0.79
COL18A1-201ENST00000342220 GP9P14770 177 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 Q8N6K4 173 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 MLST8Q9BVC4 326 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 Q9H3A6 140 aa10.12□□□□□ -0.79
COL18A1-201ENST00000342220 URB1-AS1Q96HZ7 61 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 ARL3P36405 182 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 TM4SF20Q53R12 229 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 FA2HQ7L5A8 372 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 ZNF491Q8N8L2 437 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 BAHCC1Q9P281 2608 aa10.11□□□□□ -0.79
COL18A1-201ENST00000342220 SCGB2A1O75556 95 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms