RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 MBD3L1Q8WWY6 194 aa7.48□□□□□ -1.21
TPM3-207ENST00000341372 KNCNA6PVL3 124 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 HLA-DRB4P13762 266 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 C10orf91Q5T1B1 145 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 AKR1C8PQ5T2L2 129 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 ATRAIDQ6UW56 229 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 DPPA3Q6W0C5 159 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 GATAD1Q8WUU5 269 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 SLC39A9Q9NUM3 307 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 HLA-DRB4X5D2U9 266 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 TRAV1-1A0A0B4J248 108 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 KRBOX1C9JBD0 128 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 COX7A2P2O60397 106 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 TSPAN13O95857 204 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 GIG44P09565 113 aaPredicted RBP7.47□□□□□ -1.21
TPM3-207ENST00000341372 B2MP61769 119 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 GCSAMLQ5JQS6 135 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 ACTL10Q5JWF8 245 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 MORN3Q6PF18 240 aaPredicted RBP7.47□□□□□ -1.21
TPM3-207ENST00000341372 LINC00305Q7Z4B0 112 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 MUC7Q8TAX7 377 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 PFDN5Q99471 154 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 RARRES2Q99969 163 aa7.47□□□□□ -1.21
TPM3-207ENST00000341372 SAV1Q9H4B6 383 aaPredicted RBP7.47□□□□□ -1.21
TPM3-207ENST00000341372 H3BMM0 161 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 C3orf84H3BNL1 204 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 C10orf113Q5VZT2 155 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 SPATA31B1PQ5VZV4 182 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 FOXI2Q6ZQN5 318 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 SFT2D1Q8WV19 159 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 PXMP4Q9Y6I8 212 aa7.46□□□□□ -1.22
TPM3-207ENST00000341372 TRAV8-2A0A0B4J237 113 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 A8MTW9 85 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 GUK1Q16774 197 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 FFAR4Q5NUL3 377 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 C20orf173Q96LM9 149 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 AMTP48728 403 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 FGF8P55075 233 aaPredicted RBP7.45□□□□□ -1.22
TPM3-207ENST00000341372 GDF5OSQ5U4N7 250 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 BPIFA4PQ86YQ2 179 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 KCNIP2Q9NS61 270 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 CLEC5AQ9NY25 188 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 CSMD3Q7Z407 3707 aa7.45□□□□□ -1.22
TPM3-207ENST00000341372 DYNC2H1Q8NCM8 4307 aaKnown RBP7.44□□□□□ -1.22
TPM3-207ENST00000341372 IGLC2P0DOY2 106 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 RPL24P83731 157 aaKnown RBP7.44□□□□□ -1.22
TPM3-207ENST00000341372 LCN15Q6UWW0 184 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 Q6ZVQ6 151 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 CSNK1G2-AS1Q8NCQ2 148 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 CARHSP1Q9Y2V2 147 aaKnown RBP7.44□□□□□ -1.22
TPM3-207ENST00000341372 A0A0J9YX75 114 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 HMGB3O15347 200 aaKnown RBP7.44□□□□□ -1.22
TPM3-207ENST00000341372 DEFB1P60022 68 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 OR10G4Q8NGN3 311 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 OR10G9Q8NGN4 311 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 OR10G7Q8NGN6 311 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 SLC50A1Q9BRV3 221 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 TMPRSS5Q9H3S3 457 aa7.44□□□□□ -1.22
TPM3-207ENST00000341372 STARD9Q9P2P6 4700 aa7.43□□□□□ -1.22
TPM3-207ENST00000341372 RBFOX3A6NFN3 312 aa7.43□□□□□ -1.22
TPM3-207ENST00000341372 APOC3P02656 99 aa7.43□□□□□ -1.22
TPM3-207ENST00000341372 SFTA3P0C7M3 94 aa7.43□□□□□ -1.22
TPM3-207ENST00000341372 M6PRP20645 277 aa7.43□□□□□ -1.22
TPM3-207ENST00000341372 NUTF2P61970 127 aaKnown RBP7.43□□□□□ -1.22
TPM3-207ENST00000341372 C11orf68Q9H3H3 251 aaKnown RBP7.43□□□□□ -1.22
TPM3-207ENST00000341372 ZNF331Q9NQX6 463 aaPredicted RBP7.43□□□□□ -1.22
TPM3-207ENST00000341372 TMEM14CQ9P0S9 112 aa7.43□□□□□ -1.22
TPM3-207ENST00000341372 MAP1LC3B2A6NCE7 125 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 C17orf112F2Z3M2 114 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 ZNF253O75346 499 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 ATP5LO75964 103 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 SRSF9Q13242 221 aaKnown RBP eCLIP7.42□□□□□ -1.22
TPM3-207ENST00000341372 ZNF506Q5JVG8 444 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 CASC10Q5T4H9 136 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 EBLN2Q6P2I7 272 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 ZNF709Q8N972 641 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 C1QTNF4Q9BXJ3 329 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 SEC11CQ9BY50 192 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 MAP1LC3BQ9GZQ8 125 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 KMT2CQ8NEZ4 4911 aaKnown RBP7.42□□□□□ -1.22
TPM3-207ENST00000341372 TRAV5A0A0B4J249 113 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 A0A0J9YWU9 116 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 CTXND1A0A1B0GTU2 59 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 F6UB75 175 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 SRP19P09132 144 aaKnown RBP7.42□□□□□ -1.22
TPM3-207ENST00000341372 RIGQ13278 110 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 AMTNQ6UX39 209 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 RNF182Q8N6D2 247 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 OR11H2Q8NH07 326 aa7.42□□□□□ -1.22
TPM3-207ENST00000341372 MRPL32Q9BYC8 188 aaKnown RBP7.42□□□□□ -1.22
TPM3-207ENST00000341372 F8W036 122 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 H3BQ15 152 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 SLC17A3O00476 420 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 HBE1P02100 147 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 PEA15Q15121 130 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 PSG3Q16557 428 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 ACOT6Q3I5F7 207 aaPredicted RBP7.41□□□□□ -1.22
TPM3-207ENST00000341372 SOHLH1Q5JUK2 328 aa7.41□□□□□ -1.22
TPM3-207ENST00000341372 IGFL4Q6B9Z1 124 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms