RNA–Protein interactions for RNA: ENST00000340958.3

CLDN4-201, Transcript of claudin 4, humanhuman

APPRIS P1 BASIC

Gene CLDN4, Length 1,831 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-201ENST00000340958 A0A1W2PPQ1 181 aa12.99□□□□□ -0.33
CLDN4-201ENST00000340958 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
CLDN4-201ENST00000340958 FAM3BP58499 235 aaPredicted RBP12.99□□□□□ -0.33
CLDN4-201ENST00000340958 FAM162BQ5T6X4 162 aa12.99□□□□□ -0.33
CLDN4-201ENST00000340958 LINC00322Q6ZN03 302 aaPredicted RBP12.99□□□□□ -0.33
CLDN4-201ENST00000340958 IMMP2LQ96T52 175 aa12.99□□□□□ -0.33
CLDN4-201ENST00000340958 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
CLDN4-201ENST00000340958 TRAV25A0A0B4J276 109 aa12.99□□□□□ -0.33
CLDN4-201ENST00000340958 SPAG8Q99932 426 aaPredicted RBP12.99□□□□□ -0.33
CLDN4-201ENST00000340958 RPP21Q9H633 154 aaKnown RBP12.99□□□□□ -0.33
CLDN4-201ENST00000340958 NPIPB6E9PJ23 425 aa12.98□□□□□ -0.33
CLDN4-201ENST00000340958 CA1P00915 261 aaPredicted RBP12.98□□□□□ -0.33
CLDN4-201ENST00000340958 CD33P20138 364 aa12.98□□□□□ -0.33
CLDN4-201ENST00000340958 PFN1P07737 140 aaKnown RBP12.97□□□□□ -0.33
CLDN4-201ENST00000340958 TCL1AP56279 114 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 SHISA2Q6UWI4 295 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 FAM210BQ96KR6 192 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 C19orf71A6NCJ1 209 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 J3KRW8 73 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BKO60814 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BJP06899 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BOP23527 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BBP33778 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 NDUFA6P56556 154 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BDP58876 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 DEFB131AP59861 70 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BCP62807 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST2H2BEQ16778 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.97□□□□□ -0.33
CLDN4-201ENST00000340958 LINC00482Q8N8I6 264 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 OR4B1Q8NGF8 309 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 OR2D3Q8NGH3 330 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BHQ93079 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BNQ99877 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 HIST1H2BMQ99879 126 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 WNK1Q9H4A3 2382 aa12.97□□□□□ -0.33
CLDN4-201ENST00000340958 IZUMO1RA6ND01 250 aa12.96□□□□□ -0.33
CLDN4-201ENST00000340958 SH2D1AO60880 128 aa12.96□□□□□ -0.33
CLDN4-201ENST00000340958 LENEPQ9Y5L5 61 aa12.96□□□□□ -0.33
CLDN4-201ENST00000340958 FABP5P3A8MUU1 101 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 A8MWL6 223 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 IGKV3-20P01619 116 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 FOXI2Q6ZQN5 318 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 BTF3L4Q96K17 158 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 DUSP14O95147 198 aaKnown RBP12.95□□□□□ -0.34
CLDN4-201ENST00000340958 TRGC2P03986 189 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 GPX1P07203 203 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 CRIP1P50238 77 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 GDF5OSQ5U4N7 250 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 COX8CQ7Z4L0 72 aa12.95□□□□□ -0.34
CLDN4-201ENST00000340958 PKD1L1Q8TDX9 2849 aa12.94□□□□□ -0.34
CLDN4-201ENST00000340958 A0A0J9YX75 114 aa12.94□□□□□ -0.34
CLDN4-201ENST00000340958 TMEM189A5PLL7 270 aa12.94□□□□□ -0.34
CLDN4-201ENST00000340958 ZNF80P51504 273 aaPredicted RBP12.94□□□□□ -0.34
CLDN4-201ENST00000340958 RPL19P84098 196 aaKnown RBP12.94□□□□□ -0.34
CLDN4-201ENST00000340958 TSKUQ8WUA8 353 aa12.94□□□□□ -0.34
CLDN4-201ENST00000340958 TRBV24-1A0A075B6N3 115 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 XKRY2A2RUG3 117 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 PHOX2AO14813 284 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 ORM1P02763 201 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 CT83Q5H943 113 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 PYY3Q5JQD4 70 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 ACTL10Q5JWF8 245 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 NAT8BQ9UHF3 227 aa12.93□□□□□ -0.34
CLDN4-201ENST00000340958 TMSB15BA0A087X1C1 80 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 SMIM27A0A1W2PRY6 76 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 SPINK4O60575 86 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 IGLV1-51P01701 117 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 OR2K2Q8NGT1 345 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 MAP6D1Q9H9H5 199 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 VWFP04275 2813 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 KNCNA6PVL3 124 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 S100A2P29034 98 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 RNASE4P34096 147 aaKnown RBP12.92□□□□□ -0.34
CLDN4-201ENST00000340958 HIST3H2BBQ8N257 126 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 FRZBQ92765 325 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 NEU1Q99519 415 aa12.92□□□□□ -0.34
CLDN4-201ENST00000340958 ZNF256Q9Y2P7 627 aaPredicted RBP12.92□□□□□ -0.34
CLDN4-201ENST00000340958 TRAV9-1A0A075B6T8 112 aa12.91□□□□□ -0.34
CLDN4-201ENST00000340958 HIGD1CA8MV81 97 aa12.91□□□□□ -0.34
CLDN4-201ENST00000340958 TRGC1P0CF51 173 aa12.91□□□□□ -0.34
CLDN4-201ENST00000340958 GZMBP10144 247 aa12.91□□□□□ -0.34
CLDN4-201ENST00000340958 LEPP41159 167 aa12.91□□□□□ -0.34
CLDN4-201ENST00000340958 TPPP3Q9BW30 176 aa12.91□□□□□ -0.34
CLDN4-201ENST00000340958 TRBV7-9A0A0J9YWB2 115 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 OR11H12B2RN74 326 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 CMC4P56277 68 aaPredicted RBP12.9□□□□□ -0.34
CLDN4-201ENST00000340958 APRG1Q8IVJ8 170 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 TSPOP30536 169 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 RPS20P60866 119 aaKnown RBP12.9□□□□□ -0.34
CLDN4-201ENST00000340958 ZFAND2AQ8N6M9 145 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 PYGO2Q9BRQ0 406 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 GFRA4Q9GZZ7 299 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 NAGKQ9UJ70 344 aa12.9□□□□□ -0.34
CLDN4-201ENST00000340958 TRAV21A0A0B4J279 112 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 ZNF124Q15973 351 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 C9orf66Q5T8R8 295 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 GFI1BQ5VTD9 330 aa12.89□□□□□ -0.35
CLDN4-201ENST00000340958 LINC00469Q8N7U9 141 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms