RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 FAM110DQ8TAY7 271 aaPredicted RBP11.71□□□□□ -0.53
RRP1B-201ENST00000340648 IGLV2-8P01709 118 aa11.71□□□□□ -0.54
RRP1B-201ENST00000340648 UTF1Q5T230 341 aa11.71□□□□□ -0.54
RRP1B-201ENST00000340648 C2orf82Q6UX34 121 aa11.71□□□□□ -0.54
RRP1B-201ENST00000340648 F8VRH5 84 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 ATXN8Q156A1 80 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 SMIM2Q9BVW6 85 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 DYNAPQ8N1N2 210 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 SPXQ9BT56 116 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 K7EMI3 77 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 TTTY13Q9BZ97 58 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 NUP210LQ5VU65 1888 aa11.7□□□□□ -0.54
RRP1B-201ENST00000340648 TEX48A0A1B0GUV7 120 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 IGKV1-17P01599 117 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 MSRB1Q9NZV6 116 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 GDF5OSQ5U4N7 250 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 H3BUX3 64 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 KLF12Q9Y4X4 402 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 HLA-DRB4P13762 266 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 PRSS33Q8NF86 280 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 HLA-DRB4X5D2U9 266 aa11.69□□□□□ -0.54
RRP1B-201ENST00000340648 MUC22E2RYF6 1773 aaPredicted RBP11.69□□□□□ -0.54
RRP1B-201ENST00000340648 OVOL3O00110 214 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 MSMPQ1L6U9 139 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 TRBV25-1A0A075B6N4 114 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 KAAG1Q9UBP8 84 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 CFHR4Q92496 578 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 PLCE1Q9P212 2302 aa11.68□□□□□ -0.54
RRP1B-201ENST00000340648 A0A087WX48 190 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 I3L2K1 104 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 ANXA2RQ3ZCQ2 193 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 DKK4Q9UBT3 224 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 WISP2O76076 250 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 C8orf31Q8N9H6 132 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 FAM223BA6NKX1 122 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 SPRY2O43597 315 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 TAL2Q16559 108 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 SH2D6Q7Z4S9 175 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 FAM223AQ8IWN6 122 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 TIMM21Q9BVV7 248 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 WDR87Q6ZQQ6 2873 aa11.67□□□□□ -0.54
RRP1B-201ENST00000340648 WT1P19544 449 aaPredicted RBP11.66□□□□□ -0.54
RRP1B-201ENST00000340648 PMVKQ15126 192 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 PPDPFLQ8WWR9 84 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 K7EIM0 57 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 EIF4EBP1Q13541 118 aaPredicted RBP11.66□□□□□ -0.54
RRP1B-201ENST00000340648 LINC00322Q6ZN03 302 aaPredicted RBP11.66□□□□□ -0.54
RRP1B-201ENST00000340648 FXYD2P54710 66 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 C1orf229Q6ZS94 237 aaPredicted RBP11.66□□□□□ -0.54
RRP1B-201ENST00000340648 BPESC1Q9GZL8 116 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 RNF114Q9Y508 228 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 PRR14LQ5THK1 2151 aa11.66□□□□□ -0.54
RRP1B-201ENST00000340648 ATP6V0BQ99437 205 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 TRGV2A0A075B6R0 118 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 TRAV8-3A0A0A6YYJ7 113 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 IGLV2-23P01705 113 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 FOXE3Q13461 319 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 RUSC1-AS1Q66K80 236 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 IGFL3Q6UXB1 125 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 AGPAT4-IT1Q9H0P7 198 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 A0A1B0GXF2 115 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 SDHAF1A6NFY7 115 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 TNCP24821 2201 aa11.65□□□□□ -0.54
RRP1B-201ENST00000340648 TRBV20-1A0A075B6N2 111 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 COX6B1P14854 86 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 C19orf71A6NCJ1 209 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 CTRLP40313 264 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 TCF15Q12870 199 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 OR11H6Q8NGC7 330 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 DAZ1Q9NQZ3 744 aaKnown RBP11.64□□□□□ -0.55
RRP1B-201ENST00000340648 DAZAP2Q15038 168 aaPredicted RBP11.64□□□□□ -0.55
RRP1B-201ENST00000340648 CR1LQ2VPA4 569 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 USMG5Q96IX5 58 aa11.64□□□□□ -0.55
RRP1B-201ENST00000340648 IGKV1D-37A0A075B6S9 117 aa11.63□□□□□ -0.55
RRP1B-201ENST00000340648 A0A1W2PNU3 283 aaPredicted RBP11.63□□□□□ -0.55
RRP1B-201ENST00000340648 A0A1W2PRX2 142 aa11.63□□□□□ -0.55
RRP1B-201ENST00000340648 PLA2G2CQ5R387 149 aa11.63□□□□□ -0.55
RRP1B-201ENST00000340648 IGLL5B9A064 214 aa11.63□□□□□ -0.55
RRP1B-201ENST00000340648 UBE2E1P51965 193 aa11.63□□□□□ -0.55
RRP1B-201ENST00000340648 TMEM141Q96I45 108 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 PRSS29PA6NIE9 313 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 LOXL1Q08397 574 aaPredicted RBP11.62□□□□□ -0.55
RRP1B-201ENST00000340648 BOD1L2Q8IYS8 172 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 PHLDA1Q8WV24 401 aaPredicted RBP11.62□□□□□ -0.55
RRP1B-201ENST00000340648 PEMTQ9UBM1 199 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 MORN3Q6PF18 240 aaPredicted RBP11.62□□□□□ -0.55
RRP1B-201ENST00000340648 PRSS22Q9GZN4 317 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.62□□□□□ -0.559e-7■■■■□ 22.7
RRP1B-201ENST00000340648 FGF6P10767 208 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 LY6G5BQ8NDX9 201 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 DOPEY2Q9Y3R5 2298 aa11.62□□□□□ -0.55
RRP1B-201ENST00000340648 PCNX2A6NKB5 2137 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 LY6DQ14210 128 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 ZGRF1Q86YA3 2104 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 KLK9Q9UKQ9 250 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 KNCNA6PVL3 124 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 TRPT1Q86TN4 253 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms