RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 ATG101Q9BSB4 218 aa11.79□□□□□ -0.52
BRCC3-202ENST00000340647 H3BNG1 76 aa11.78□□□□□ -0.52
BRCC3-202ENST00000340647 MED14OSP0DP75 135 aa11.78□□□□□ -0.52
BRCC3-202ENST00000340647 ZNF266Q14584 549 aa11.78□□□□□ -0.52
BRCC3-202ENST00000340647 KHDC3LQ587J8 217 aa11.78□□□□□ -0.52
BRCC3-202ENST00000340647 IBA57Q5T440 356 aaKnown RBP11.78□□□□□ -0.52
BRCC3-202ENST00000340647 HSPG2P98160 4391 aa11.78□□□□□ -0.52
BRCC3-202ENST00000340647 A0A096LPF7 62 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 TRGV1A0A0A0MS02 117 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 HMGB3O15347 200 aaKnown RBP11.77□□□□□ -0.53
BRCC3-202ENST00000340647 PTTG1O95997 202 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 CCL18P55774 89 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 TNP2Q05952 138 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 KRTAP4-5Q9BYR2 181 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 MDFICQ9P1T7 246 aa11.77□□□□□ -0.53
BRCC3-202ENST00000340647 Q6AWC8 147 aa11.76□□□□□ -0.53
BRCC3-202ENST00000340647 AQP10Q96PS8 301 aa11.76□□□□□ -0.53
BRCC3-202ENST00000340647 OTORQ9NRC9 128 aa11.76□□□□□ -0.53
BRCC3-202ENST00000340647 MRPL16Q9NX20 251 aaKnown RBP11.76□□□□□ -0.53
BRCC3-202ENST00000340647 DNAH5Q8TE73 4624 aa11.76□□□□□ -0.53
BRCC3-202ENST00000340647 PGPA6NDG6 321 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 G3V3Q6 166 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 TAS2R45P59539 299 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 ACOT6Q3I5F7 207 aaPredicted RBP11.75□□□□□ -0.53
BRCC3-202ENST00000340647 MUC21Q5SSG8 566 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 SUN5Q8TC36 379 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 HYLS1Q96M11 299 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 UPK3BQ9BT76 320 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 Q9H8V8 135 aa11.75□□□□□ -0.53
BRCC3-202ENST00000340647 TRAV8-1A0A0A6YYK1 113 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 RGS13O14921 159 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 GNG5P63218 68 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 OR10G4Q8NGN3 311 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 OR10G9Q8NGN4 311 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 OR10G7Q8NGN6 311 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 OR2G3Q8NGZ4 309 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 ST6GAL2Q96JF0 529 aa11.74□□□□□ -0.53
BRCC3-202ENST00000340647 TRGV2A0A075B6R0 118 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 RNF222A6NCQ9 220 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 IGHV3-53P01767 116 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 STAG3L2P0CL84 134 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 STAG3L3P0CL85 134 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 ARL14EPLP0DKL9 152 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 ATP6V0CP27449 155 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 CSN1S1P47710 185 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 FHL2Q14192 279 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 PQLC2Q6ZP29 291 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 C6orf223Q8N319 242 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 HSD17B11Q8NBQ5 300 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 TMED6Q8WW62 240 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 MED28Q9H204 178 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 SH3BGRL3Q9H299 93 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 LENEPQ9Y5L5 61 aa11.73□□□□□ -0.53
BRCC3-202ENST00000340647 PSMG3Q9BT73 122 aaPredicted RBP11.72□□□□□ -0.53
BRCC3-202ENST00000340647 MRPS16Q9Y3D3 137 aaKnown RBP11.72□□□□□ -0.53
BRCC3-202ENST00000340647 APOBP04114 4563 aaKnown RBP11.72□□□□□ -0.53
BRCC3-202ENST00000340647 TDRG1Q3Y452 100 aa11.71□□□□□ -0.53
BRCC3-202ENST00000340647 GOLT1AQ6ZVE7 132 aa11.71□□□□□ -0.53
BRCC3-202ENST00000340647 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.53
BRCC3-202ENST00000340647 RAB24Q969Q5 203 aa11.71□□□□□ -0.53
BRCC3-202ENST00000340647 A0A1W2PPV4 95 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 GNRH2O43555 120 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 IGLV2-11P01706 119 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 GIPP09681 153 aaPredicted RBP11.7□□□□□ -0.54
BRCC3-202ENST00000340647 CRYBA4P53673 196 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 SOHLH1Q5JUK2 328 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 SGK494Q96LW2 274 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 RPH3ALQ9UNE2 315 aa11.7□□□□□ -0.54
BRCC3-202ENST00000340647 F6UZH7 168 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 SFTA3P0C7M3 94 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 GCHFRP30047 84 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 CDC34P49427 236 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-202ENST00000340647 ZNF80P51504 273 aaPredicted RBP11.69□□□□□ -0.54
BRCC3-202ENST00000340647 ZNF415Q09FC8 603 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 ZNF726P1Q15940 193 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 TMEM183BQ1AE95 376 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 RPL7L1Q6DKI1 246 aaKnown RBP11.69□□□□□ -0.54
BRCC3-202ENST00000340647 TMEM183AQ8IXX5 376 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 RASL10AQ92737 203 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 ZNF479Q96JC4 524 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 ARPC5LQ9BPX5 153 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 C11orf21Q9P2W6 132 aa11.69□□□□□ -0.54
BRCC3-202ENST00000340647 IGHV3-16A0A0C4DH30 117 aa11.68□□□□□ -0.54
BRCC3-202ENST00000340647 C8orf49Q96NF6 230 aa11.68□□□□□ -0.54
BRCC3-202ENST00000340647 TNFSF18Q9UNG2 199 aa11.68□□□□□ -0.54
BRCC3-202ENST00000340647 GGTLC3B5MD39 225 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 PAX4O43316 350 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 TYMSP04818 313 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 SERF2P84101 59 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 CMTM2Q8TAZ6 248 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 PRO0255Q9UI72 69 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 HHLA3Q9XRX5 114 aa11.67□□□□□ -0.54
BRCC3-202ENST00000340647 TCRAP04437 139 aa11.66□□□□□ -0.54
BRCC3-202ENST00000340647 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
BRCC3-202ENST00000340647 Q6ZRN7 208 aaPredicted RBP11.66□□□□□ -0.54
BRCC3-202ENST00000340647 IQCF2Q8IXL9 164 aa11.66□□□□□ -0.54
BRCC3-202ENST00000340647 TREM1Q9NP99 234 aa11.66□□□□□ -0.54
BRCC3-202ENST00000340647 LYPD5Q6UWN5 251 aa11.65□□□□□ -0.54
BRCC3-202ENST00000340647 SPXQ9BT56 116 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms