RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 LINC00336Q6ZUF6 198 aa10.85□□□□□ -0.67
VAPA-201ENST00000340541 TVP23CQ96ET8 276 aa10.85□□□□□ -0.67
VAPA-201ENST00000340541 FAM210BQ96KR6 192 aa10.85□□□□□ -0.67
VAPA-201ENST00000340541 NDUFAF3Q9BU61 184 aa10.85□□□□□ -0.67
VAPA-201ENST00000340541 TMEM167BQ9NRX6 74 aa10.85□□□□□ -0.67
VAPA-201ENST00000340541 TRAV8-1A0A0A6YYK1 113 aa10.84□□□□□ -0.67
VAPA-201ENST00000340541 A0A0D9SG52 128 aa10.84□□□□□ -0.67
VAPA-201ENST00000340541 CBY3A6NI87 242 aa10.84□□□□□ -0.67
VAPA-201ENST00000340541 DAZ2Q13117 558 aaKnown RBP10.84□□□□□ -0.67
VAPA-201ENST00000340541 AKR1C8PQ5T2L2 129 aa10.84□□□□□ -0.67
VAPA-201ENST00000340541 EIF4E3Q8N5X7 224 aaKnown RBP10.84□□□□□ -0.67
VAPA-201ENST00000340541 C5orf17Q8NAS9 161 aa10.84□□□□□ -0.67
VAPA-201ENST00000340541 TMPRSS5Q9H3S3 457 aa10.84□□□□□ -0.67
VAPA-201ENST00000340541 IGHV1OR15-1A0A075B7D0 117 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 BCL2L11O43521 198 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 TCRAP04437 139 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 Q6AWC8 147 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 TMEM88Q6PEY1 159 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 GSN-AS1Q9NRJ2 163 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 TP53TG3Q9ULZ0 132 aa10.83□□□□□ -0.68
VAPA-201ENST00000340541 A0A1W2PRE2 83 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 SNURFLB1AK76 121 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 IGLV2-11P01706 119 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 ATP5G1P05496 136 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 ATP5G3P48201 142 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 FHITP49789 147 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 FGF8P55075 233 aaPredicted RBP10.82□□□□□ -0.68
VAPA-201ENST00000340541 SUMO1P63165 101 aaKnown RBP10.82□□□□□ -0.68
VAPA-201ENST00000340541 ZNF680Q8NEM1 530 aa10.82□□□□□ -0.68
VAPA-201ENST00000340541 SERTM2A0A1B0GWG4 89 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 RGS13O14921 159 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 SEC11BP0C7V7 166 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 P0DMU3 169 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 FAM231AP0DMU4 169 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 FAM231CP0DMU5 169 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 TCL1AP56279 114 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 IBA57Q5T440 356 aaKnown RBP10.81□□□□□ -0.68
VAPA-201ENST00000340541 Q6ZTI0 123 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 IQCF2Q8IXL9 164 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 TCTE3Q8IZS6 198 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 SGK494Q96LW2 274 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 ZNF471Q9BX82 626 aaPredicted RBP10.81□□□□□ -0.68
VAPA-201ENST00000340541 EPDR1Q9UM22 224 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 KLF12Q9Y4X4 402 aa10.81□□□□□ -0.68
VAPA-201ENST00000340541 KANTRA0A1W2PQU2 76 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 GAGE12BA1L429 117 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 MAP1LC3B2A6NCE7 125 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 F5H768 121 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 GAGE7O76087 117 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 GAGE12FP0CL80 117 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 GAGE12GP0CL81 117 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 GAGE12IP0CL82 117 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 MUC21Q5SSG8 566 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 TMUB2Q71RG4 321 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 MAP1LC3BQ9GZQ8 125 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 DNAH10Q8IVF4 4471 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 HECTD4Q9Y4D8 3996 aa10.8□□□□□ -0.68
VAPA-201ENST00000340541 FAM74A7A6NL05 159 aa10.79□□□□□ -0.68
VAPA-201ENST00000340541 F6UZH7 168 aa10.79□□□□□ -0.68
VAPA-201ENST00000340541 POM121L12Q8N7R1 296 aa10.79□□□□□ -0.68
VAPA-201ENST00000340541 TREM1Q9NP99 234 aa10.79□□□□□ -0.68
VAPA-201ENST00000340541 SPINK4O60575 86 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 HOXA5P20719 270 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 UBE2G2P60604 165 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 TDRG1Q3Y452 100 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 LGALSLQ3ZCW2 172 aaPredicted RBP10.78□□□□□ -0.68
VAPA-201ENST00000340541 CYB561D1Q8N8Q1 229 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 C18orf15Q96N68 181 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 ATG101Q9BSB4 218 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 PSG8Q9UQ74 426 aa10.78□□□□□ -0.68
VAPA-201ENST00000340541 UMAD1C9J7I0 102 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 PFDN1O60925 122 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 ZNF80P51504 273 aaPredicted RBP10.77□□□□□ -0.69
VAPA-201ENST00000340541 FLI1Q01543 452 aaPredicted RBP10.77□□□□□ -0.69
VAPA-201ENST00000340541 TMEM75Q8N9X5 138 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 STOML3Q8TAV4 291 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 MBD3L1Q8WWY6 194 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 LINC00479Q96M42 142 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 C8orf49Q96NF6 230 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 MDFICQ9P1T7 246 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 MUC4Q99102 2169 aa10.77□□□□□ -0.69
VAPA-201ENST00000340541 TRGV1A0A0A0MS02 117 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 TRAV21A0A0B4J279 112 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 K7EQM0 130 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 C1QBP02746 253 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 TPT1P13693 172 aaKnown RBP10.76□□□□□ -0.69
VAPA-201ENST00000340541 C15orf53Q8NAA6 179 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 FAM213BQ8TBF2 198 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 NACAE9PAV3 2078 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 HERC2O95714 4834 aa10.76□□□□□ -0.69
VAPA-201ENST00000340541 hCG_2014768A0A024R1R8 64 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 FBLL1A6NHQ2 334 aaKnown RBP10.75□□□□□ -0.69
VAPA-201ENST00000340541 PEX7O00628 323 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 EIF5AP63241 154 aaKnown RBP10.75□□□□□ -0.69
VAPA-201ENST00000340541 ZNF415Q09FC8 603 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 TMEM183BQ1AE95 376 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 LGALS9BQ3B8N2 356 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 FAM159AQ6UWV7 190 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 DPPA3Q6W0C5 159 aa10.75□□□□□ -0.69
VAPA-201ENST00000340541 PRNTQ86SH4 94 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms