RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 VMO1Q7Z5L0 202 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 SMIM2Q9BVW6 85 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 VPREB3Q9UKI3 123 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 IGKV3D-11A0A0A0MRZ8 115 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 TRBV10-1A0A0K0K1A3 114 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 PRSS46E5RG02 174 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 RFESDQ8TAC1 157 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 TDGF1P3P51864 188 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 PIFOQ8TCI5 191 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 MORN2Q502X0 79 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 HIST3H2BBQ8N257 126 aa2.67□□□□□ -1.98
CSMD3-202ENST00000339701 TRAV14DV4A0A0A6YYC5 116 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MBD3L4A6NDZ8 208 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MBD3L3A6NE82 208 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MBD3L5A6NJ08 208 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 LY6G6DO95868 133 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 CLPSP04118 112 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TPTE2P1Q5T6R2 138 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 PRIMA1Q86XR5 153 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 Q8N1Y9 231 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 C9orf106Q8NAJ2 232 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MBD3L2Q8NHZ7 208 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TRAV25A0A0B4J276 109 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 C5orf63A6NC05 138 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 IGHV3-13P01766 116 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 H2BFSP57053 126 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 ZNF497Q6ZNH5 498 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 LINC00643Q86TS7 51 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TRAV12-1A0A0B4J245 112 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 H3BUT2 72 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 I3L3M4 83 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 DAZ2Q13117 558 aaKnown RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 FAM74A4Q5TZK3 123 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 DAZ4Q86SG3 579 aaKnown RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 DAZ3Q9NR90 486 aaKnown RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 KAAG1Q9UBP8 84 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TRBV25-1A0A075B6N4 114 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 PAX8Q06710 450 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MUC21A0A140T8X8 626 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 J3KRW8 73 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 LYPD3O95274 346 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 IGKV3-20P01619 116 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 SMIM10L1P0DMW3 83 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 PPIFP30405 207 aaKnown RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 DAZAP2Q15038 168 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 EFNB3Q15768 340 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MUC21Q5SSG8 566 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 LINC00114Q6XXX2 140 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 SMIM10Q96HG1 83 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TRBV6-1A0A0K0K1D8 114 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM213A2RRL7 107 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 CD28P10747 220 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MST1P26927 711 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 NDUFA11Q86Y39 141 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 WNT10AQ9GZT5 417 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MSGN1A6NI15 193 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 SERF1AO75920 110 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 MRGPRG-AS1Q2M3A8 158 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 C7orf33Q8WU49 177 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TNFRSF12AQ9NP84 129 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 ANKRD17O75179 2603 aaKnown RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 SDHAF1A6NFY7 115 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 PAX4O43316 350 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 EFNA2O43921 213 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 EIF4EBP3O60516 100 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 CELA2AP08217 269 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 APELAP0DMC3 54 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 ICAM4Q14773 271 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 NMSQ5H8A3 153 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 LINC01590Q5TEZ4 76 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 PRO1933Q9H354 126 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 ORMDL1Q9P0S3 153 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 GZMMP51124 257 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 TMEM219Q86XT9 240 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 RTBDNQ9BSG5 229 aaPredicted RBP2.66□□□□□ -1.98
CSMD3-202ENST00000339701 SIGLEC9Q9Y336 463 aa2.66□□□□□ -1.98
CSMD3-202ENST00000339701 GAGE12HA6NDE8 117 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 BCE1O60756 84 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 PSG4Q00888 419 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 Q6Q795 121 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 NRACQ8N912 160 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 PSG8Q9UQ74 426 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 ZNF561-AS1K7EIQ3 104 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 OPRPNQ99935 248 aaPredicted RBP2.65□□□□□ -1.98
CSMD3-202ENST00000339701 TIAF1O95411 115 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 IGHG3P01860 377 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 LINC00479Q96M42 142 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 TIMM17AQ99595 171 aa2.65□□□□□ -1.98
CSMD3-202ENST00000339701 J3QL48 77 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 K7EM74 188 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 LAIR2Q6ISS4 152 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 TRAV3A0A0B4J244 114 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 A0A0J9YW62 118 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 IGHV3-7P01780 117 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 CECR9P0C854 216 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 C17orf82Q86X59 251 aaPredicted RBP2.65□□□□□ -1.99
CSMD3-202ENST00000339701 Q8N8P6 123 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 IMMP1LQ96LU5 166 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 ODF3Q96PU9 254 aa2.65□□□□□ -1.99
CSMD3-202ENST00000339701 TRAV41A0A0B4J266 112 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms