RNA–Protein interactions for RNA: ENST00000339037.3

LINC01116-202, Transcript of long intergenic non-protein coding RNA 1116, humanhuman

TSL 3 BASIC

Gene LINC01116, Length 838 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01116-202ENST00000339037 PRAF2O60831 178 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 H2BFSP57053 126 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 ANXA2RQ3ZCQ2 193 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 EIF4E3Q8N5X7 224 aaKnown RBP10.69□□□□□ -0.7
LINC01116-202ENST00000339037 FAM19A4Q96LR4 140 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 LINC00467Q9BRT7 94 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 PRELID1Q9Y255 219 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 ICOSQ9Y6W8 199 aa10.69□□□□□ -0.7
LINC01116-202ENST00000339037 IGKV2-40A0A087WW87 121 aaPredicted RBP10.68□□□□□ -0.7
LINC01116-202ENST00000339037 PAX4O43316 350 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 SPINK4O60575 86 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 ZNF324O75467 553 aaPredicted RBP10.68□□□□□ -0.7
LINC01116-202ENST00000339037 IGKV2D-40P01614 121 aaPredicted RBP10.68□□□□□ -0.7
LINC01116-202ENST00000339037 FUSP35637 526 aaKnown RBP eCLIP10.68□□□□□ -0.7
LINC01116-202ENST00000339037 TCL1AP56279 114 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 CD300CQ08708 224 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 ICAM4Q14773 271 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 ST6GAL2Q96JF0 529 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 WDR61Q9GZS3 305 aaKnown RBP10.68□□□□□ -0.7
LINC01116-202ENST00000339037 AGPAT4-IT1Q9H0P7 198 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 KLF12Q9Y4X4 402 aa10.68□□□□□ -0.7
LINC01116-202ENST00000339037 OR10J4P0C629 311 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 RNASE4P34096 147 aaKnown RBP10.67□□□□□ -0.7
LINC01116-202ENST00000339037 FAM122CQ6P4D5 195 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 LYPD1Q8N2G4 141 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 PPP1R1CQ8WVI7 109 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 LINC00477Q96M19 166 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 MARVELD1Q9BSK0 173 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 AAMDCQ9H7C9 122 aa10.67□□□□□ -0.7
LINC01116-202ENST00000339037 IGHV3-53P01767 116 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 GPX1P07203 203 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 INAFM2P0DMQ5 153 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 CYCSP99999 105 aaKnown RBP10.66□□□□□ -0.7
LINC01116-202ENST00000339037 IBA57Q5T440 356 aaKnown RBP10.66□□□□□ -0.7
LINC01116-202ENST00000339037 PRR9Q5T870 116 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 NFE4Q86UQ8 179 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 FXYD5Q96DB9 178 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 PHYHIPLQ96FC7 376 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 VGLL1Q99990 258 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 MRPL32Q9BYC8 188 aaKnown RBP10.66□□□□□ -0.7
LINC01116-202ENST00000339037 OR51M1Q9H341 326 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 PRO0255Q9UI72 69 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 TNFRSF18Q9Y5U5 241 aa10.66□□□□□ -0.7
LINC01116-202ENST00000339037 NMBP08949 121 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 NBEAP1P0C6P0 100 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 CRISP2P16562 243 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 XGP55808 180 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 SLAQ13239 276 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 Q6ZQT7 251 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 ATP5SQ99766 215 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 PAXXQ9BUH6 204 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 KCNIP2Q9NS61 270 aa10.65□□□□□ -0.7
LINC01116-202ENST00000339037 MRPL16Q9NX20 251 aaKnown RBP10.65□□□□□ -0.7
LINC01116-202ENST00000339037 FLG2Q5D862 2391 aaPredicted RBP10.64□□□□□ -0.71
LINC01116-202ENST00000339037 SSNA1O43805 119 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 MPC2O95563 127 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 IFNA5P01569 189 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 DNAH10OSP0CZ25 163 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 MRPL23Q16540 153 aaKnown RBP10.64□□□□□ -0.71
LINC01116-202ENST00000339037 TMEM78Q5T7P6 136 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 Q5VSD8 79 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 LYPD5Q6UWN5 251 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 ZFAND2AQ8N6M9 145 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 FRZBQ92765 325 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 ARPC5LQ9BPX5 153 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 TP53TG3Q9ULZ0 132 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 HHLA3Q9XRX5 114 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 HSPB11Q9Y547 144 aa10.64□□□□□ -0.71
LINC01116-202ENST00000339037 TRAV9-2A0A087WT02 112 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 A0A087WTM6 91 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 C17orf112F2Z3M2 114 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 OR7C2O60412 319 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 CRYBA4P53673 196 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 Q8TAT8 98 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 C8orf49Q96NF6 230 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 SMIM3Q9BZL3 60 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 ZNF492Q9P255 531 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 LY96Q9Y6Y9 160 aa10.63□□□□□ -0.71
LINC01116-202ENST00000339037 IGHV1OR15-1A0A075B7D0 117 aa10.62□□□□□ -0.71
LINC01116-202ENST00000339037 FFAR4Q5NUL3 377 aa10.62□□□□□ -0.71
LINC01116-202ENST00000339037 NEGR1Q7Z3B1 354 aa10.62□□□□□ -0.71
LINC01116-202ENST00000339037 EIF3GO75821 320 aaKnown RBP eCLIP10.61□□□□□ -0.71
LINC01116-202ENST00000339037 PET100P0DJ07 73 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 RPL12P30050 165 aaKnown RBP10.61□□□□□ -0.71
LINC01116-202ENST00000339037 DEFA1P59665 94 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 DEFA3P59666 94 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 KRTAP10-1P60331 282 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 UBE2L3P68036 154 aaKnown RBP10.61□□□□□ -0.71
LINC01116-202ENST00000339037 ZNF415Q09FC8 603 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 FHL2Q14192 279 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 MBD2Q9UBB5 411 aa10.61□□□□□ -0.71
LINC01116-202ENST00000339037 TRGV4A0A0C4DH28 118 aa10.6□□□□□ -0.71
LINC01116-202ENST00000339037 K7EP13 123 aa10.6□□□□□ -0.71
LINC01116-202ENST00000339037 SRIP30626 198 aa10.6□□□□□ -0.71
LINC01116-202ENST00000339037 ZNF138P52744 262 aa10.6□□□□□ -0.71
LINC01116-202ENST00000339037 RANP62826 216 aaKnown RBP10.6□□□□□ -0.71
LINC01116-202ENST00000339037 MSRB1Q9NZV6 116 aa10.6□□□□□ -0.71
LINC01116-202ENST00000339037 EVI2AP22794 236 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms