RNA–Protein interactions for RNA: ENST00000336216.8

HMG20A-201, Transcript of high mobility group 20A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMG20A, Length 4,046 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-201ENST00000336216 PSMG4Q5JS54 123 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 FXYD5Q96DB9 178 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 FAM167A-AS1Q96KT0 104 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 CSTL1Q9H114 145 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 IGHV3-73A0A0B4J1V6 119 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 PSMB11A5LHX3 300 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 SEC11AP67812 179 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 PSG3Q16557 428 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 ORMDL3Q8N138 153 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 NPFFR1Q9GZQ6 430 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 MS4A6AQ9H2W1 248 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 SNRPD3P62318 126 aaKnown RBP5.12□□□□□ -1.59
HMG20A-201ENST00000336216 RASL11AQ6T310 242 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 OR4X2Q8NGF9 303 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 C8orf49Q96NF6 230 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 ZFHX3Q15911 3703 aa5.12□□□□□ -1.59
HMG20A-201ENST00000336216 NBPF19A0A087WUL8 3843 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 A0A1B0GWB2 263 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 PRSS46E5RG02 174 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 NDUFA3O95167 84 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 LEPP41159 167 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 CDSNQ15517 529 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 AMTNQ6UX39 209 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 DUX3Q96PT4 197 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 VWC2LB2RUY7 222 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 B4DSR2 109 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 COX8AP10176 69 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 BLCAPP62952 87 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 ZNF418Q8TF45 676 aaPredicted RBP5.11□□□□□ -1.59
HMG20A-201ENST00000336216 MAST4O15021 2626 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 CFAP46Q8IYW2 2715 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 HBDP02042 147 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 IGLC1P0CG04 106 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 ZFP36P26651 326 aaKnown RBP5.11□□□□□ -1.59
HMG20A-201ENST00000336216 SYNJ2BPP57105 145 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 DEFB1P60022 68 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 LOXL1Q08397 574 aaPredicted RBP5.11□□□□□ -1.59
HMG20A-201ENST00000336216 EIF4EBP1Q13541 118 aaPredicted RBP5.11□□□□□ -1.59
HMG20A-201ENST00000336216 ETDBQ3ZM63 59 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 DKK2Q9UBU2 259 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 MOB4Q9Y3A3 225 aa5.11□□□□□ -1.59
HMG20A-201ENST00000336216 TRAV12-3A0A0B4J271 114 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 IGKV3D-20A0A0C4DH25 116 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 IGHV4-61A0A0C4DH41 118 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 HSD52Q0P140 79 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 C3orf36Q3SXR2 165 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 SIGLEC15Q6ZMC9 328 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 FAM231DQ6ZW35 169 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 Q86TA4 180 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 LINC00477Q96M19 166 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 KALRNO60229 2985 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 M0R1W7 72 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 CIDEAO60543 219 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 RAB9AP51151 201 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 ADAMTSL5Q6ZMM2 481 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 SOX21Q9Y651 276 aaPredicted RBP5.1□□□□□ -1.59
HMG20A-201ENST00000336216 C9orf118A6NHY6 69 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 F6UB75 175 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 KLF5Q13887 457 aaPredicted RBP5.1□□□□□ -1.59
HMG20A-201ENST00000336216 TMEM170BQ5T4T1 132 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 C14orf178Q8N769 122 aaPredicted RBP5.1□□□□□ -1.59
HMG20A-201ENST00000336216 JMJD8Q96S16 334 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 SIGMAR1Q99720 223 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 ZNF747Q9BV97 191 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 RHPN1-AS1Q9BWJ2 59 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 SCRT2Q9NQ03 307 aa5.1□□□□□ -1.59
HMG20A-201ENST00000336216 TSSC4Q9Y5U2 329 aaPredicted RBP5.1□□□□□ -1.59
HMG20A-201ENST00000336216 TEX48A0A1B0GUV7 120 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 APOMO95445 188 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 MSMBP08118 114 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 ASIPP42127 132 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 ZC2HC1BQ5TFG8 222 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 MINOS1Q5TGZ0 78 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 PIP4P2Q8N4L2 257 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 MBD6Q96DN6 1003 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 SIGLEC8Q9NYZ4 499 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 KAAG1Q9UBP8 84 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 MINOS1-NBL1R4GNA1 71 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 SH2D1AO60880 128 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 UBE2E1P51965 193 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 VGLL1Q99990 258 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 SHANK2-AS3Q9BTD1 123 aa5.09□□□□□ -1.59
HMG20A-201ENST00000336216 IGHV4-30-2A0A087WSY4 118 aa5.09□□□□□ -1.6
HMG20A-201ENST00000336216 IGKV1-17P01599 117 aa5.09□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV4-38-2P0DP08 117 aa5.09□□□□□ -1.6
HMG20A-201ENST00000336216 SH2D6Q7Z4S9 175 aa5.09□□□□□ -1.6
HMG20A-201ENST00000336216 WIPF2Q8TF74 440 aaPredicted RBP5.09□□□□□ -1.6
HMG20A-201ENST00000336216 ZNF479Q96JC4 524 aa5.09□□□□□ -1.6
HMG20A-201ENST00000336216 A0A087WWL8 130 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 C19orf84I3L1E1 186 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 AZU1P20160 251 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 NSUN5P1Q3KNT7 163 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 HIST2H2BDQ6DRA6 164 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 ZNF491Q8N8L2 437 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 LINC01587Q99440 93 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 PRSS22Q9GZN4 317 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 AGRNO00468 2067 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 TRBV19A0A075B6N1 114 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 IGHV3-64A0A075B6Q5 118 aa5.08□□□□□ -1.6
HMG20A-201ENST00000336216 A0A0U1RRA0 63 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms