RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 IGKV2-40A0A087WW87 121 aaPredicted RBP18.95■□□□□ 0.62
SOX1-201ENST00000330949 LINC01549A6NIU2 74 aa18.95■□□□□ 0.62
SOX1-201ENST00000330949 IGKV2D-40P01614 121 aaPredicted RBP18.95■□□□□ 0.62
SOX1-201ENST00000330949 CRYGBP07316 175 aa18.95■□□□□ 0.62
SOX1-201ENST00000330949 GATA1P15976 413 aaPredicted RBP18.95■□□□□ 0.62
SOX1-201ENST00000330949 ORM1P02763 201 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 ZNF688P0C7X2 276 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 CCL8P80075 99 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 FAM27E3Q08E93 113 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 PTH2Q96A98 100 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 F8VRH5 84 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 H7C1H1 209 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 ZNF80P51504 273 aaPredicted RBP18.94■□□□□ 0.62
SOX1-201ENST00000330949 UFC1Q9Y3C8 167 aa18.94■□□□□ 0.62
SOX1-201ENST00000330949 UBE2D3P61077 147 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 UBE2D2P62837 147 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 DTX2Q86UW9 622 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 PPP1R27Q86WC6 154 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 B5MCH6 92 aa18.93■□□□□ 0.62
SOX1-201ENST00000330949 TRAV12-1A0A0B4J245 112 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 TNFRSF13BO14836 293 aaPredicted RBP18.92■□□□□ 0.62
SOX1-201ENST00000330949 CNTFRP26992 372 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 LRBAP50851 2863 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 LGALS1P09382 135 aaKnown RBP18.92■□□□□ 0.62
SOX1-201ENST00000330949 UBE2D1P51668 147 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 ZNF575Q86XF7 245 aa18.92■□□□□ 0.62
SOX1-201ENST00000330949 NBASA2RRP1 2371 aa18.91■□□□□ 0.62
SOX1-201ENST00000330949 Q8TAT8 98 aa18.91■□□□□ 0.62
SOX1-201ENST00000330949 SVEP1Q4LDE5 3571 aa18.91■□□□□ 0.62
SOX1-201ENST00000330949 A8MWV9 139 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 ZFP2Q6ZN57 461 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 TRBV20-1A0A075B6N2 111 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 TMEM95Q3KNT9 176 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 TMEM78Q5T7P6 136 aa18.9■□□□□ 0.62
SOX1-201ENST00000330949 RAXQ9Y2V3 346 aa18.89■□□□□ 0.61
SOX1-201ENST00000330949 FABP5P3A8MUU1 101 aa18.89■□□□□ 0.61
SOX1-201ENST00000330949 K7EIM0 57 aa18.89■□□□□ 0.61
SOX1-201ENST00000330949 PRB3Q04118 309 aaPredicted RBP18.88■□□□□ 0.61
SOX1-201ENST00000330949 SBSPONQ8IVN8 264 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 ZZEF1O43149 2961 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 OR11H6Q8NGC7 330 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 CITED1Q99966 193 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 APC2O95996 2303 aa18.88■□□□□ 0.61
SOX1-201ENST00000330949 SRD5A1P18405 259 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 SFTA2Q6UW10 78 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 FAM215AQ9Y5M1 114 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 EFNA4P52798 201 aa18.87■□□□□ 0.61
SOX1-201ENST00000330949 SRSF9Q13242 221 aaKnown RBP eCLIP18.87■□□□□ 0.61
SOX1-201ENST00000330949 ZNF318Q5VUA4 2279 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 FCN3O75636 299 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 FAM90A27PA6NNH2 459 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 SCGB1D4Q6XE38 83 aa18.86■□□□□ 0.61
SOX1-201ENST00000330949 SRSF8Q9BRL6 282 aaKnown RBP18.86■□□□□ 0.61
SOX1-201ENST00000330949 CEP295Q9C0D2 2601 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 PSMG3-AS1Q96PY0 264 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 TRBV7-9A0A0J9YWB2 115 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 NDUFB3O43676 98 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 NHLRC4P0CG21 123 aaPredicted RBP18.85■□□□□ 0.61
SOX1-201ENST00000330949 C3orf36Q3SXR2 165 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 NRACQ8N912 160 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 FAM110AQ9BQ89 295 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 RAB1BQ9H0U4 201 aa18.85■□□□□ 0.61
SOX1-201ENST00000330949 SPTA1P02549 2419 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 RHODO00212 210 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 FBXL15Q9H469 300 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 MALRD1Q5VYJ5 2156 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 ZNF815PA8K554 130 aa18.84■□□□□ 0.61
SOX1-201ENST00000330949 RPL7P18124 248 aaKnown RBP18.84■□□□□ 0.61
SOX1-201ENST00000330949 TCL1BO95988 128 aa18.83■□□□□ 0.61
SOX1-201ENST00000330949 IL17RELQ6ZVW7 336 aa18.83■□□□□ 0.61
SOX1-201ENST00000330949 DLX1P56177 255 aa18.83■□□□□ 0.6
SOX1-201ENST00000330949 ANKRD29Q8N6D5 301 aa18.83■□□□□ 0.6
SOX1-201ENST00000330949 LINC01548A6NM66 108 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 IGHV1-8P0DP01 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 IGFL2Q6UWQ7 119 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 PRADC1Q9BSG0 188 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 CD7P09564 240 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12JA6NER3 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 H3BVH4 76 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE7O76087 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12FP0CL80 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12GP0CL81 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE12IP0CL82 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 ASIPP42127 132 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 DLX6P56179 175 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE2BQ13066 116 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE4Q13068 117 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE2EQ4V326 116 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 GAGE2DQ9UEU5 116 aa18.82■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L4A6NDZ8 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L3A6NE82 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L5A6NJ08 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 SHISA2Q6UWI4 295 aa18.81■□□□□ 0.6
SOX1-201ENST00000330949 MBD3L2Q8NHZ7 208 aaPredicted RBP18.81■□□□□ 0.6
SOX1-201ENST00000330949 KIR2DL4Q99706 377 aa18.81■□□□□ 0.6
SOX1-201ENST00000330949 PIP4P1Q86T03 277 aa18.81■□□□□ 0.6
SOX1-201ENST00000330949 NDUFV3P56181 108 aaKnown RBP18.8■□□□□ 0.6
SOX1-201ENST00000330949 ZNF672Q499Z4 452 aaPredicted RBP18.8■□□□□ 0.6
SOX1-201ENST00000330949 NDUFA11Q86Y39 141 aa18.8■□□□□ 0.6
SOX1-201ENST00000330949 TRGV3P03979 118 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms