RNA–Protein interactions for RNA: ENST00000328514.11

GINS3-202, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-202ENST00000328514 NCBP2LA6PVI3 153 aaKnown RBP8.74□□□□□ -1.01
GINS3-202ENST00000328514 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.74□□□□□ -1.01
GINS3-202ENST00000328514 CFAP161Q6P656 301 aa8.74□□□□□ -1.01
GINS3-202ENST00000328514 IGFL3Q6UXB1 125 aa8.74□□□□□ -1.01
GINS3-202ENST00000328514 MTURNQ8N3F0 131 aa8.74□□□□□ -1.01
GINS3-202ENST00000328514 NPBQ8NG41 125 aa8.74□□□□□ -1.01
GINS3-202ENST00000328514 FANCD2OSQ96PS1 177 aa8.74□□□□□ -1.01
GINS3-202ENST00000328514 TMEM160Q9NX00 188 aa8.74□□□□□ -1.01
GINS3-202ENST00000328514 AKAP13Q12802 2813 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 DMXL2Q8TDJ6 3036 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 IGHV4-4A0A075B6R2 117 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 NDUFA3O95167 84 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 ORM1P02763 201 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 RAB9AP51151 201 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 CKS1BP61024 79 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 NRACQ8N912 160 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 Q8TAT8 98 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 RNASE6Q93091 150 aaKnown RBP8.73□□□□□ -1.01
GINS3-202ENST00000328514 HIST1H4GQ99525 98 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 SMAD5-AS1Q9Y6J3 95 aa8.73□□□□□ -1.01
GINS3-202ENST00000328514 PRRG2O14669 202 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 PRB4P10163 310 aaPredicted RBP8.72□□□□□ -1.01
GINS3-202ENST00000328514 MORN3Q6PF18 240 aaPredicted RBP8.72□□□□□ -1.01
GINS3-202ENST00000328514 MRPL16Q9NX20 251 aaKnown RBP8.72□□□□□ -1.01
GINS3-202ENST00000328514 AGRNO00468 2067 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 F8VRH5 84 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 NBR2O15453 112 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 BSPH1Q075Z2 132 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 FOXI1Q12951 378 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 KLRD1Q13241 179 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 CFAP126Q5VTH2 177 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 CLUHP3Q96NS8 147 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 C1QTNF4Q9BXJ3 329 aa8.72□□□□□ -1.01
GINS3-202ENST00000328514 MYMXA0A1B0GTQ4 84 aa8.71□□□□□ -1.02
GINS3-202ENST00000328514 H7C1H1 209 aa8.71□□□□□ -1.02
GINS3-202ENST00000328514 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
GINS3-202ENST00000328514 SCGB2A2Q13296 93 aa8.71□□□□□ -1.02
GINS3-202ENST00000328514 AMTNQ6UX39 209 aa8.71□□□□□ -1.02
GINS3-202ENST00000328514 C21orf62Q9NYP8 219 aa8.71□□□□□ -1.02
GINS3-202ENST00000328514 HECTD1Q9ULT8 2610 aa8.71□□□□□ -1.02
GINS3-202ENST00000328514 USP9XQ93008 2570 aaPredicted RBP8.71□□□□□ -1.02
GINS3-202ENST00000328514 APOMO95445 188 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 PRB1P04280 392 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 SLC25A16P16260 332 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 INSL3P51460 131 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 CDIP1Q9H305 208 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 OR11H12B2RN74 326 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 K7EMI3 77 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 TIMM23O14925 209 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 HOXA3O43365 443 aaPredicted RBP8.7□□□□□ -1.02
GINS3-202ENST00000328514 SCGB2A1O75556 95 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 OR11H1Q8NG94 326 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 OR11H2Q8NH07 326 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 FAM57AQ8TBR7 257 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 ZNF418Q8TF45 676 aaPredicted RBP8.7□□□□□ -1.02
GINS3-202ENST00000328514 CFHR4Q92496 578 aa8.7□□□□□ -1.02
GINS3-202ENST00000328514 LAMA5O15230 3695 aa8.69□□□□□ -1.02
GINS3-202ENST00000328514 IGKV3D-20A0A0C4DH25 116 aa8.69□□□□□ -1.02
GINS3-202ENST00000328514 PLA2G2AP14555 144 aa8.69□□□□□ -1.02
GINS3-202ENST00000328514 C8orf86Q6ZUL3 223 aa8.69□□□□□ -1.02
GINS3-202ENST00000328514 DYNAPQ8N1N2 210 aa8.69□□□□□ -1.02
GINS3-202ENST00000328514 DLX4Q92988 240 aaPredicted RBP8.69□□□□□ -1.02
GINS3-202ENST00000328514 CYSLTR1Q9Y271 337 aa8.69□□□□□ -1.02
GINS3-202ENST00000328514 ROS1P08922 2347 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 IGHV7-4-1A0A0J9YVY3 117 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 SPAARA0A1B0GVQ0 90 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 CTSGP08311 255 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
GINS3-202ENST00000328514 UBE2D1P51668 147 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 DLX1P56177 255 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 ATP5G2Q06055 141 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 C5orf64Q2M2E5 130 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 DEFB109BQ30KR1 87 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 OR11H6Q8NGC7 330 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 VCX2Q9H322 139 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 TRGV3P03979 118 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 COX7A1P24310 79 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 CRYBA4P53673 196 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 NEXN-AS1Q8NBZ9 246 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 C20orf78Q9BR46 151 aa8.68□□□□□ -1.02
GINS3-202ENST00000328514 ZGRF1Q86YA3 2104 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 TRAV26-1A0A087WT03 109 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 LGALS1P09382 135 aaKnown RBP8.67□□□□□ -1.02
GINS3-202ENST00000328514 HLA-DMBP28068 263 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 UBE2D3P61077 147 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 UBE2D2P62837 147 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 KLK9Q2XQG4 91 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 ORMDL2Q53FV1 153 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 LY6G5BQ8NDX9 201 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 TOMM6Q96B49 74 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 MRPL53Q96EL3 112 aaKnown RBP8.67□□□□□ -1.02
GINS3-202ENST00000328514 SLC50A1Q9BRV3 221 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 SMIM2Q9BVW6 85 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 GEMIN7Q9H840 131 aaKnown RBP8.67□□□□□ -1.02
GINS3-202ENST00000328514 DYNLRB1Q9NP97 96 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 HIF1ANQ9NWT6 349 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 C11orf21Q9P2W6 132 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 DPM3Q9P2X0 92 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 KLK9Q9UKQ9 250 aa8.67□□□□□ -1.02
GINS3-202ENST00000328514 S4R3C0 116 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms